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激素诱导的转录去抑制中的DNA去甲基化

DNA demethylation in hormone-induced transcriptional derepression.

作者信息

Kim Mi-Sun, Kondo Takeshi, Takada Ichiro, Youn Min-Young, Yamamoto Yoko, Takahashi Sayuri, Matsumoto Takahiro, Fujiyama Sally, Shirode Yuko, Yamaoka Ikuko, Kitagawa Hirochika, Takeyama Ken-ichi, Shibuya Hiroshi, Ohtake Fumiaki, Kato Shigeaki

机构信息

ERATO, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchisi, Saitama 332-0012, Japan.

出版信息

Nature. 2009 Oct 15;461(7266):1007-12. doi: 10.1038/nature08456.

Abstract

Epigenetic modifications at the histone level affect gene regulation in response to extracellular signals. However, regulated epigenetic modifications at the DNA level, especially active DNA demethylation, in gene activation are not well understood. Here we report that DNA methylation/demethylation is hormonally switched to control transcription of the cytochrome p450 27B1 (CYP27B1) gene. Reflecting vitamin-D-mediated transrepression of the CYP27B1 gene by the negative vitamin D response element (nVDRE), methylation of CpG sites ((5m)CpG) is induced by vitamin D in this gene promoter. Conversely, treatment with parathyroid hormone, a hormone known to activate the CYP27B1 gene, induces active demethylation of the (5m)CpG sites in this promoter. Biochemical purification of a complex associated with the nVDRE-binding protein (VDIR, also known as TCF3) identified two DNA methyltransferases, DNMT1 and DNMT3B, for methylation of CpG sites, as well as a DNA glycosylase, MBD4 (ref. 10). Protein-kinase-C-phosphorylated MBD4 by parathyroid hormone stimulation promotes incision of methylated DNA through glycosylase activity, and a base-excision repair process seems to complete DNA demethylation in the MBD4-bound promoter. Such parathyroid-hormone-induced DNA demethylation and subsequent transcriptional derepression are impaired in Mbd4(-/-) mice. Thus, the present findings suggest that methylation switching at the DNA level contributes to the hormonal control of transcription.

摘要

组蛋白水平的表观遗传修饰会影响基因对细胞外信号的调控。然而,在基因激活过程中,DNA水平上受调控的表观遗传修饰,尤其是主动DNA去甲基化,目前还未被充分理解。在此,我们报告DNA甲基化/去甲基化受激素调控,以控制细胞色素P450 27B1(CYP27B1)基因的转录。负性维生素D反应元件(nVDRE)介导维生素D对CYP27B1基因的反式抑制,该基因启动子中的CpG位点((5m)CpG)甲基化由维生素D诱导。相反,甲状旁腺激素(一种已知可激活CYP27B1基因的激素)处理可诱导该启动子中(5m)CpG位点的主动去甲基化。对与nVDRE结合蛋白(VDIR,也称为TCF3)相关复合物的生化纯化鉴定出两种DNA甲基转移酶DNMT1和DNMT3B,它们负责CpG位点的甲基化,以及一种DNA糖基化酶MBD4(参考文献10)。甲状旁腺激素刺激使蛋白激酶C磷酸化MBD4,通过糖基化酶活性促进甲基化DNA的切口形成,碱基切除修复过程似乎完成了MBD4结合启动子中的DNA去甲基化。在Mbd4(-/-)小鼠中,甲状旁腺激素诱导的这种DNA去甲基化及随后的转录去抑制受损。因此,目前的研究结果表明DNA水平的甲基化转换有助于转录的激素调控。

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