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衰老小鼠白蛋白尿的遗传分析及其与全基因组关联扫描中发现的人类糖尿病肾病相关位点的一致性。

Genetic analysis of albuminuria in aging mice and concordance with loci for human diabetic nephropathy found in a genome-wide association scan.

机构信息

The Jackson Laboratory, Bar Harbor, Maine, USA.

出版信息

Kidney Int. 2010 Feb;77(3):201-10. doi: 10.1038/ki.2009.434. Epub 2009 Nov 18.

Abstract

Aging in the kidney can cause albuminuria, and discovering molecular mechanisms responsible for this might offer a new perspective on the etiology of this abnormality. Haplotype association mapping in the mouse is a novel approach which uses the haplotypes of the relatively closely related mouse inbred strains and the phenotypic variation among these strains to find associations between haplotypes and phenotype. The albumin-to-creatinine ratios, a measure of urinary albumin excretion, were determined in 30 inbred mouse strains at 12, 18, and 24 months of age. Mapping was performed for males and females separately at all three time points using a high density set of 63,222 single-nucleotide polymorphisms to determine genetic loci involved in albuminuria. One significant and eight suggestive loci were found, some of which map to previously identified loci for traits associated with kidney damage in the mouse, but with a much higher resolution thus narrowing their chromosomal location. These nine loci were then compared with genome-wide association scans for diabetic nephropathy (DN) in human type I diabetes. Our study found that two of the nine mouse loci for age-related albuminuria were significantly associated with DN and consistent across male and female strata. This suggests common underlying genes predispose to kidney disease in mice and humans.

摘要

肾脏衰老会导致白蛋白尿,而发现导致这种情况的分子机制可能为这种异常的病因提供新的视角。小鼠的单体型关联作图是一种新颖的方法,它利用相对密切相关的小鼠近交系的单体型以及这些系之间的表型变异,来寻找单体型与表型之间的关联。在 30 个近交系小鼠中,分别在 12、18 和 24 个月大时测定白蛋白与肌酐的比值,以衡量尿白蛋白的排泄量。使用高密度的 63222 个单核苷酸多态性对雄性和雌性在所有三个时间点进行了作图,以确定与白蛋白尿相关的遗传基因座。发现了一个显著和八个提示的基因座,其中一些与先前鉴定的与小鼠肾脏损伤相关的性状的基因座相映射,但分辨率更高,从而缩小了它们的染色体位置。然后将这 9 个基因座与人类 1 型糖尿病的糖尿病肾病(DN)的全基因组关联扫描进行了比较。我们的研究发现,与年龄相关的白蛋白尿的 9 个小鼠基因座中的两个与 DN 显著相关,并且在男性和女性两个层次上都是一致的。这表明,共同的潜在基因易患小鼠和人类的肾脏疾病。

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本文引用的文献

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Haplotype association mapping in mice.小鼠中的单倍型关联图谱分析
Methods Mol Biol. 2009;573:213-22. doi: 10.1007/978-1-60761-247-6_12.
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Mamm Genome. 2008 Mar;19(3):199-208. doi: 10.1007/s00335-008-9098-9. Epub 2008 Feb 27.
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Genetic analysis of albuminuria in a cross between C57BL/6J and DBA/2J mice.C57BL/6J小鼠与DBA/2J小鼠杂交后代蛋白尿的遗传分析。
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