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基于核基因和线粒体基因推断 Xylosandrus Reitter 的多系性(鞘翅目:象甲科:小蠹科)。

Polyphyly of Xylosandrus Reitter inferred from nuclear and mitochondrial genes (Coleoptera: Curculionidae: Scolytinae).

机构信息

Department of Entomology, Michigan State University, 243 Natural Science, East Lansing, MI 48824, USA.

出版信息

Mol Phylogenet Evol. 2010 Mar;54(3):773-82. doi: 10.1016/j.ympev.2009.11.011. Epub 2009 Nov 17.

Abstract

The Xyleborina ambrosia beetle genus Xylosandrus contains 54 species, several of which are of economic importance. The monophyly of the genus was tested using a data set comprised of multiple gene loci: 28S rDNA; the mitochondrial gene cytochrome oxidase I (COI); and the nuclear genes arginine kinase (ArgK), rudimentary (CAD), and Elongation Factor 1alpha (EF-1alpha). The nuclear protein-coding genes CAD and ArgK were used for the first time in phylogenetics of Scolytinae. Analyses were performed using Parsimony and Bayesian optimality criteria. Our analyses included 43 specimens representing 15 Xylosandrus species and 20 species from Amasa, Anisandrus, Cnestus, Euwallacea and Xyleborus, and two species from the outgroup genus Coccotrypes. All analyses recovered a polyphyletic Xylosandrus. Several species of Xylosandrus were consistently placed in clades with the genera Anisandrus and Cnestus with high support values (100% bootstrap support). Among these, was the economically important invasive species X. mutilatus, which was consistently recovered as part of the "Cnestus" clade. In our analyses, both CAD and ArgK demonstrated phylogenetic utility across varying nodal depths. Despite the selection of genes with signals at complementary phylogenetic depths, the data set used herein did not resolve the phylogeny of Xylosandrus and related genera. Since the taxon sample available for molecular work represents only a fraction of Xylosandrus species, a complete revision that combines molecular and morphological data in a total evidence approach is recommended for the genus.

摘要

棘胫小蠹属 Xylosandrus 包含 54 个物种,其中有几个具有经济重要性。该属的单系性使用多个基因座的数据集进行了测试:28S rDNA;线粒体基因细胞色素氧化酶 I (COI);以及核基因精氨酸激酶 (ArgK)、基本 CAD 和延伸因子 1alpha (EF-1alpha)。核蛋白编码基因 CAD 和 ArgK 首次用于小蠹科的系统发育研究。分析使用简约法和贝叶斯最优性标准进行。我们的分析包括代表 15 种棘胫小蠹和 Amasa、Anisandrus、Cnestus、Euwallacea 和 Xyleborus 20 个种以及外群属 Coccotrypes 的两个种的 43 个标本。所有分析均恢复了多系的棘胫小蠹属。一些棘胫小蠹物种与 Anisandrus 和 Cnestus 属的物种一致地被放置在具有高支持值(100% 自举支持)的进化枝中。其中包括具有经济重要性的入侵物种 X. mutilatus,它一直被恢复为“Cnestus”进化枝的一部分。在我们的分析中,CAD 和 ArgK 都表现出在不同节点深度下的系统发育实用性。尽管选择了在互补系统发育深度下具有信号的基因,但本文使用的数据集中并未解决棘胫小蠹属及其相关属的系统发育问题。由于用于分子工作的分类群样本仅代表棘胫小蠹属物种的一小部分,因此建议采用结合分子和形态数据的总证据方法对该属进行全面修订。

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