Suppr超能文献

基于贝叶斯网络的组合神经元同步推断。

Inference of combinatorial neuronal synchrony with Bayesian networks.

机构信息

Computational Biology Division, Translational Genomics Research Institute, 445 North 5th Street, Phoenix, AZ 85004, USA.

出版信息

J Neurosci Methods. 2010 Jan 30;186(1):130-9. doi: 10.1016/j.jneumeth.2009.11.003. Epub 2009 Dec 1.

Abstract

Various methods have been used to infer functional synchrony between neuronal channels using electrode signal recordings. Such methods vary from approaches to identify the groups of neuronal channels that show similar signal patterns to approaches to figure out connectivity between neuronal channels. The inference of detailed connectivity between neuronal channels from electrode signal recordings can be computationally more complex than identifying the groups of neuronal channels. For this reason, most of previous approaches to infer connectivity between neuronal channels were based on pairwise measures. In this work, we propose the degree of combinatorial synchrony (DoCS) based on Bayesian networks for more enhanced inference of neuronal synchrony. DoCS is evaluated as the likelihood of edge connections in Bayesian network structures that capture the combinatorial dependency between neuronal channels. From the comparison with a cross-correlation measure using artificial neuronal networks, we validate that the proposed DoCS shows more accurate inference of neuronal synchrony when target neuronal networks include combinatorial synchrony.

摘要

已经使用各种方法来推断使用电极信号记录的神经元通道之间的功能同步性。这些方法从识别显示相似信号模式的神经元通道组的方法到确定神经元通道之间的连接性的方法各不相同。从电极信号记录推断神经元通道之间的详细连接性在计算上可能比识别神经元通道组更为复杂。出于这个原因,以前大多数推断神经元通道之间的连接性的方法都是基于成对的测量。在这项工作中,我们基于贝叶斯网络提出了组合同步度(DoCS),以更增强对神经元同步性的推断。DoCS 被评估为贝叶斯网络结构中边缘连接的可能性,该结构捕获了神经元通道之间的组合依赖性。通过与使用人工神经元网络的互相关测量进行比较,我们验证了当目标神经元网络包括组合同步性时,所提出的 DoCS 可以更准确地推断神经元同步性。

相似文献

1
Inference of combinatorial neuronal synchrony with Bayesian networks.
J Neurosci Methods. 2010 Jan 30;186(1):130-9. doi: 10.1016/j.jneumeth.2009.11.003. Epub 2009 Dec 1.
2
Revealing neuronal functional organization through the relation between multi-scale oscillatory extracellular signals.
J Neurosci Methods. 2010 Jan 30;186(1):116-29. doi: 10.1016/j.jneumeth.2009.10.024. Epub 2009 Nov 10.
3
Bayesian population decoding of motor cortical activity using a Kalman filter.
Neural Comput. 2006 Jan;18(1):80-118. doi: 10.1162/089976606774841585.
4
Bayesian spiking neurons I: inference.
Neural Comput. 2008 Jan;20(1):91-117. doi: 10.1162/neco.2008.20.1.91.
5
The emergence and properties of mutual synchronization in in vitro coupled cortical networks.
Eur J Neurosci. 2008 Nov;28(9):1825-35. doi: 10.1111/j.1460-9568.2008.06487.x.
6
Global and local synchrony of coupled neurons in small-world networks.
Biol Cybern. 2004 Apr;90(4):302-9. doi: 10.1007/s00422-004-0471-9. Epub 2004 Apr 8.
7
Multiscale evolving complex network model of functional connectivity in neuronal cultures.
IEEE Trans Biomed Eng. 2012 Jan;59(1):30-4. doi: 10.1109/TBME.2011.2171340. Epub 2011 Oct 13.
9
Bayesian spiking neurons II: learning.
Neural Comput. 2008 Jan;20(1):118-45. doi: 10.1162/neco.2008.20.1.118.
10
Simultaneous rate-synchrony codes in populations of spiking neurons.
Neural Comput. 2006 Jan;18(1):45-59. doi: 10.1162/089976606774841521.

引用本文的文献

1
Bayesian networks in neuroscience: a survey.
Front Comput Neurosci. 2014 Oct 16;8:131. doi: 10.3389/fncom.2014.00131. eCollection 2014.
2
Fast inference of interactions in assemblies of stochastic integrate-and-fire neurons from spike recordings.
J Comput Neurosci. 2011 Oct;31(2):199-227. doi: 10.1007/s10827-010-0306-8. Epub 2011 Jan 11.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验