• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

评估人类线粒体 DNA 控制区的长度异质性。

Evaluating length heteroplasmy in the human mitochondrial DNA control region.

机构信息

Institute of Legal Medicine, University of Münster, Röntgenstrasse 23, Münster, Germany.

出版信息

Int J Legal Med. 2010 Mar;124(2):133-42. doi: 10.1007/s00414-009-0385-0.

DOI:10.1007/s00414-009-0385-0
PMID:19937256
Abstract

We present allelic data for three known and one new C-tract in the human mitochondrial DNA (mtDNA) control region, and we measure intergenerational mutation rates at such C-tracts. In detail, in a sample of 1,172 mtDNA sequences, we demonstrate the existence of an instability threshold of eight consecutive cytosines, at and above which the phenomenon of length heteroplasmy arises. To determine mutation rates, we draw on mtDNA sequences in up to four generations of 248 pedigrees for families living in high or low-radiation environmental conditions. The high-radiation sample gives the most conservative (fastest) mutation rate likely to be encountered in any forensic context. We find that the C-tract mutation rate is up to 6% per generation, and we observe an excess of cytosine gains over losses. Case studies and guidelines for evaluating mtDNA heteroplasmy are provided.

摘要

我们呈现了人类线粒体 DNA(mtDNA)控制区中三个已知和一个新的 C 链段的等位基因数据,并测量了这些 C 链段的代际突变率。具体来说,在 1172 个 mtDNA 序列的样本中,我们证明了存在一个连续八个胞嘧啶的不稳定性阈值,超过这个阈值,长度异质性现象就会出现。为了确定突变率,我们利用生活在高或低辐射环境条件下的 248 个家系的多达四代 mtDNA 序列。高辐射样本给出了最保守(最快)的突变率,这可能在任何法医学背景下都会遇到。我们发现 C 链段的突变率高达每代 6%,并且我们观察到胞嘧啶的获得超过了缺失。我们提供了案例研究和评估 mtDNA 异质性的指导方针。

相似文献

1
Evaluating length heteroplasmy in the human mitochondrial DNA control region.评估人类线粒体 DNA 控制区的长度异质性。
Int J Legal Med. 2010 Mar;124(2):133-42. doi: 10.1007/s00414-009-0385-0.
2
Segregation of point mutation heteroplasmy in the control region of dog mtDNA studied systematically in deep generation pedigrees.系统研究深代系谱中犬 mtDNA 控制区点突变异质体的分离。
Int J Legal Med. 2011 Jul;125(4):527-35. doi: 10.1007/s00414-010-0524-7. Epub 2010 Nov 4.
3
Investigation of heteroplasmy in the human mitochondrial DNA control region: a synthesis of observations from more than 5000 global population samples.人类线粒体DNA控制区异质性研究:来自5000多个全球人群样本的观察结果综述
J Mol Evol. 2009 May;68(5):516-27. doi: 10.1007/s00239-009-9227-4. Epub 2009 May 1.
4
Impact of the sequencing method on the detection and interpretation of mitochondrial DNA length heteroplasmy.测序方法对线粒体 DNA 长度异质性检测和解释的影响。
Forensic Sci Int Genet. 2020 Jan;44:102205. doi: 10.1016/j.fsigen.2019.102205. Epub 2019 Nov 10.
5
MtDNA substitution rate and segregation of heteroplasmy in coding and noncoding regions.线粒体DNA替代率以及编码区和非编码区异质性的分离
Hum Genet. 2000 Jul;107(1):45-50. doi: 10.1007/s004390000305.
6
Sequence polymorphism of mitochondrial DNA control region in Japanese.日本人线粒体DNA控制区的序列多态性
Forensic Sci Int. 1998 Nov 9;97(2-3):155-64. doi: 10.1016/s0379-0738(98)00153-4.
7
Lack of Structural Variation but Extensive Length Polymorphisms and Heteroplasmic Length Variations in the Mitochondrial DNA Control Region of Highly Inbred Crested Ibis, Nipponia nippon.高度近亲繁殖的朱鹮(Nipponia nippon)线粒体DNA控制区缺乏结构变异但存在广泛的长度多态性和异质性长度变异。
PLoS One. 2013 Jun 21;8(6):e66324. doi: 10.1371/journal.pone.0066324. Print 2013.
8
Investigation of length heteroplasmy in mitochondrial DNA control region by massively parallel sequencing.通过大规模平行测序技术对线粒体DNA控制区长度异质性的研究。
Forensic Sci Int Genet. 2017 Sep;30:127-133. doi: 10.1016/j.fsigen.2017.07.003. Epub 2017 Jul 10.
9
Mutation patterns of mtDNA: empirical inferences for the coding region.线粒体DNA的突变模式:编码区的实证推断
BMC Evol Biol. 2008 Jun 2;8:167. doi: 10.1186/1471-2148-8-167.
10
Nuclear mitochondrial interplay in the modulation of the homopolymeric tract length heteroplasmy in the control (D-loop) region of the mitochondrial DNA.线粒体DNA控制区(D环)中核与线粒体在调节同聚物序列长度异质性方面的相互作用。
Hum Genet. 2002 May;110(5):402-11. doi: 10.1007/s00439-002-0717-3. Epub 2002 Apr 4.

引用本文的文献

1
DNA and protein analyses of hair in forensic genetics.法医遗传学中毛发的DNA和蛋白质分析。
Int J Legal Med. 2023 May;137(3):613-633. doi: 10.1007/s00414-023-02955-w. Epub 2023 Feb 3.
2
Mitochondrial DNA Mutations Induced by Carbon Ions Radiation: A Preliminary Study.碳离子辐射诱导的线粒体DNA突变:一项初步研究。
Dose Response. 2018 Aug 8;16(3):1559325818789842. doi: 10.1177/1559325818789842. eCollection 2018 Jul-Sep.
3
Length heterogeneity at conserved sequence block 2 in human mitochondrial DNA acts as a rheostat for RNA polymerase POLRMT activity.

本文引用的文献

1
Investigation of heteroplasmy in the human mitochondrial DNA control region: a synthesis of observations from more than 5000 global population samples.人类线粒体DNA控制区异质性研究:来自5000多个全球人群样本的观察结果综述
J Mol Evol. 2009 May;68(5):516-27. doi: 10.1007/s00239-009-9227-4. Epub 2009 May 1.
2
Detection of the A189G mtDNA heteroplasmic mutation in relation to age in modern and ancient bones.现代和古代骨骼中与年龄相关的A189G线粒体DNA异质性突变的检测
Int J Legal Med. 2009 Mar;123(2):161-7. doi: 10.1007/s00414-008-0266-y. Epub 2008 Jul 12.
3
Frequency and pattern of heteroplasmy in the control region of human mitochondrial DNA.
人类线粒体DNA中保守序列块2的长度异质性充当RNA聚合酶POLRMT活性的变阻器。
Nucleic Acids Res. 2016 Sep 19;44(16):7817-29. doi: 10.1093/nar/gkw648. Epub 2016 Jul 19.
4
Mitochondrial mutations in subjects with psychiatric disorders.患有精神疾病的受试者的线粒体突变。
PLoS One. 2015 May 26;10(5):e0127280. doi: 10.1371/journal.pone.0127280. eCollection 2015.
5
Length heteroplasmy of the polyC-polyT-polyC stretch in the dog mtDNA control region.犬线粒体DNA控制区中聚C-聚T-聚C序列的长度异质性
Int J Legal Med. 2015 Sep;129(5):927-35. doi: 10.1007/s00414-014-1106-x. Epub 2014 Nov 14.
6
Development and assessment of an optimized next-generation DNA sequencing approach for the mtgenome using the Illumina MiSeq.使用Illumina MiSeq开发和评估一种针对线粒体基因组的优化下一代DNA测序方法。
Forensic Sci Int Genet. 2014 Nov;13:20-9. doi: 10.1016/j.fsigen.2014.05.007. Epub 2014 May 20.
7
Lack of Structural Variation but Extensive Length Polymorphisms and Heteroplasmic Length Variations in the Mitochondrial DNA Control Region of Highly Inbred Crested Ibis, Nipponia nippon.高度近亲繁殖的朱鹮(Nipponia nippon)线粒体DNA控制区缺乏结构变异但存在广泛的长度多态性和异质性长度变异。
PLoS One. 2013 Jun 21;8(6):e66324. doi: 10.1371/journal.pone.0066324. Print 2013.
8
From next-generation sequencing alignments to accurate comparison and validation of single-nucleotide variants: the pibase software.从下一代测序比对到单核苷酸变异的精确比较和验证:pibase 软件。
Nucleic Acids Res. 2013 Jan 7;41(1):e16. doi: 10.1093/nar/gks836. Epub 2012 Sep 10.
9
Second generation sequencing allows for mtDNA mixture deconvolution and high resolution detection of heteroplasmy.第二代测序技术能够实现线粒体DNA混合样本的解卷积分析以及异质性的高分辨率检测。
Croat Med J. 2011 Jun;52(3):299-313. doi: 10.3325/cmj.2011.52.299.
10
Evaluating sequence-derived mtDNA length heteroplasmy by amplicon size analysis.基于扩增片段大小分析评估序列衍生的线粒体 DNA 长度异质性。
Forensic Sci Int Genet. 2011 Mar;5(2):142-5. doi: 10.1016/j.fsigen.2010.10.002. Epub 2010 Nov 9.
人类线粒体DNA控制区异质性的频率与模式。
J Mol Evol. 2008 Aug;67(2):191-200. doi: 10.1007/s00239-008-9138-9. Epub 2008 Jul 11.
4
Consistent treatment of length variants in the human mtDNA control region: a reappraisal.人类线粒体DNA控制区长度变异的一致性处理:重新评估
Int J Legal Med. 2008 Jan;122(1):11-21. doi: 10.1007/s00414-006-0151-5. Epub 2007 Mar 9.
5
Discovery of a major D-loop replication origin reveals two modes of human mtDNA synthesis.一个主要D环复制起点的发现揭示了人类线粒体DNA合成的两种模式。
Science. 2004 Dec 17;306(5704):2098-101. doi: 10.1126/science.1102077.
6
Mitochondrial DNA CA dinucleotide repeats in Koreans: the presence of length heteroplasmy.韩国人中的线粒体DNA CA二核苷酸重复序列:长度异质性的存在
Int J Legal Med. 2005 Jan;119(1):50-3. doi: 10.1007/s00414-004-0487-7. Epub 2004 Sep 17.
7
Different methods to determine length heteroplasmy within the mitochondrial control region.确定线粒体控制区内长度异质性的不同方法。
Int J Legal Med. 2004 Oct;118(5):274-81. doi: 10.1007/s00414-004-0457-0.
8
Mitochondrial DNA control region diversity in hairs and body fluids of monozygotic triplets.单卵三胞胎毛发和体液中线粒体DNA控制区的多样性
Int J Legal Med. 2004 Apr;118(2):71-4. doi: 10.1007/s00414-003-0409-0. Epub 2003 Oct 31.
9
Natural radioactivity and human mitochondrial DNA mutations.天然放射性与人类线粒体DNA突变
Proc Natl Acad Sci U S A. 2002 Oct 15;99(21):13950-4. doi: 10.1073/pnas.202400499. Epub 2002 Oct 7.
10
An annotated mtDNA database.一个带注释的线粒体DNA数据库。
Int J Legal Med. 2001 Aug;115(1):29-39. doi: 10.1007/s004140100217.