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体外载脂蛋白B信使核糖核酸编辑:27S编辑复合体的鉴定

In vitro apolipoprotein B mRNA editing: identification of a 27S editing complex.

作者信息

Smith H C, Kuo S R, Backus J W, Harris S G, Sparks C E, Sparks J D

机构信息

Department of Pathology and Laboratory Medicine, University of Rochester, NY 14642.

出版信息

Proc Natl Acad Sci U S A. 1991 Feb 15;88(4):1489-93. doi: 10.1073/pnas.88.4.1489.

DOI:10.1073/pnas.88.4.1489
PMID:1996349
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC51044/
Abstract

Specific apolipoprotein B (apoB) mRNA editing can be performed in vitro on apoB RNA substrates. Native gels and glycerol gradient sedimentation have been used to determine the physical properties of the in vitro editing activity in rat liver cytosolic S100 extracts. ApoB RNA substrates were progressively assembled as 27S complexes for 3 hr with similar kinetics as seen for the accumulation of edited RNA. Assembly was not observed on RNAs from apoB deletion constructs that did not support editing. The 27S complex contained both edited and unedited RNA sequences. Inhibition of 27S complex assembly by vanadyl-ribonucleoside complexes was accompanied by inhibition of editing. Based on these data, we propose that the 27S complex is the in vitro "editosome," A "mooring sequence" model for RNA recognition and editosome assembly has been proposed involving RNA sequences flanking the edited nucleotide.

摘要

特定的载脂蛋白B(apoB)mRNA编辑可在体外对apoB RNA底物进行。天然凝胶和甘油梯度沉降已被用于确定大鼠肝脏胞质S100提取物中体外编辑活性的物理性质。apoB RNA底物在3小时内逐渐组装成27S复合物,其动力学与编辑RNA积累时观察到的相似。在不支持编辑的apoB缺失构建体的RNA上未观察到组装。27S复合物包含编辑和未编辑的RNA序列。钒核糖核苷复合物对27S复合物组装的抑制伴随着编辑的抑制。基于这些数据,我们提出27S复合物是体外“编辑体”。已经提出了一种用于RNA识别和编辑体组装的“系泊序列”模型,该模型涉及编辑核苷酸侧翼的RNA序列。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/06171052d4a9/pnas01054-0418-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/cb27c7126607/pnas01054-0415-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/6d496ed72d48/pnas01054-0416-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/7b698bed8f6b/pnas01054-0416-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/d6f0434c2b1c/pnas01054-0416-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/0f3132d58935/pnas01054-0416-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/3ccc984a33bb/pnas01054-0416-e.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/b0f60ddaee6a/pnas01054-0416-f.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/0db1ee42dcbb/pnas01054-0417-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/06171052d4a9/pnas01054-0418-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/cb27c7126607/pnas01054-0415-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/6d496ed72d48/pnas01054-0416-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/7b698bed8f6b/pnas01054-0416-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/d6f0434c2b1c/pnas01054-0416-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/0f3132d58935/pnas01054-0416-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/3ccc984a33bb/pnas01054-0416-e.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/b0f60ddaee6a/pnas01054-0416-f.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/0db1ee42dcbb/pnas01054-0417-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9f/51044/06171052d4a9/pnas01054-0418-a.jpg

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本文引用的文献

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Metabolic heterogeneity of apolipoprotein B in the rat.大鼠载脂蛋白B的代谢异质性
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APOBEC1 complementation factor (A1CF) is dispensable for C-to-U RNA editing in vivo.载脂蛋白B mRNA编辑酶催化多肽1互补因子(A1CF)在体内对C到U的RNA编辑过程并非必需。
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Identification of DNA cleavage- and recombination-specific hnRNP cofactors for activation-induced cytidine deaminase.鉴定激活诱导胞苷脱氨酶的DNA切割和重组特异性hnRNP辅因子。
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The multifaceted roles of RNA binding in APOBEC cytidine deaminase functions.RNA结合在载脂蛋白B胞苷脱氨酶功能中的多方面作用。
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