Suppr超能文献

依赖于 ATP 的人类 RISCs 组装途径。

ATP-dependent human RISC assembly pathways.

机构信息

Institute of Molecular and Cellular Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.

出版信息

Nat Struct Mol Biol. 2010 Jan;17(1):17-23. doi: 10.1038/nsmb.1733. Epub 2009 Dec 6.

Abstract

The assembly of RNA-induced silencing complex (RISC) is a key process in small RNA-mediated gene silencing. In humans, small interfering RNAs (siRNAs) and microRNAs (miRNAs) are incorporated into RISCs containing the Argonaute (AGO) subfamily proteins Ago1-4. Previous studies have proposed that, unlike Drosophila melanogaster RISC assembly pathways, human RISC assembly is coupled with dicing and is independent of ATP. Here we show by careful reexamination that, in humans, RISC assembly and dicing are uncoupled, and ATP greatly facilitates RISC loading of small-RNA duplexes. Moreover, all four human AGO proteins show remarkably similar structural preferences for small-RNA duplexes: central mismatches promote RISC loading, and seed or 3'-mid (guide position 12-15) mismatches facilitate unwinding. All these features of human AGO proteins are highly reminiscent of fly Ago1 but not fly Ago2.

摘要

RNA 诱导沉默复合物(RISC)的组装是小 RNA 介导的基因沉默的关键过程。在人类中,小干扰 RNA(siRNA)和 microRNA(miRNA)被整合到含有 Argonaute(AGO)亚家族蛋白 Ago1-4 的 RISC 中。先前的研究表明,与果蝇 RISC 组装途径不同,人类 RISC 组装与 Dicer 的切割过程解耦,并且不依赖于 ATP。在这里,我们通过仔细的重新检查表明,在人类中,RISC 组装和 Dicer 的切割过程是解耦的,并且 ATP 极大地促进了小 RNA 双链体加载到 RISC 中。此外,所有四种人类 AGO 蛋白对小 RNA 双链体表现出非常相似的结构偏好:中心错配促进 RISC 加载,而种子或 3'-mid(引导位置 12-15)错配促进解链。人类 AGO 蛋白的所有这些特征都非常类似于果蝇 Ago1,但不同于果蝇 Ago2。

相似文献

1
ATP-dependent human RISC assembly pathways.
Nat Struct Mol Biol. 2010 Jan;17(1):17-23. doi: 10.1038/nsmb.1733. Epub 2009 Dec 6.
2
Structural determinants of miRNAs for RISC loading and slicer-independent unwinding.
Nat Struct Mol Biol. 2009 Sep;16(9):953-60. doi: 10.1038/nsmb.1630. Epub 2009 Aug 16.
4
Increased siRNA duplex stability correlates with reduced off-target and elevated on-target effects.
RNA. 2011 Apr;17(4):737-49. doi: 10.1261/rna.2348111. Epub 2011 Mar 2.
5
A human, ATP-independent, RISC assembly machine fueled by pre-miRNA.
Genes Dev. 2005 Dec 15;19(24):2979-90. doi: 10.1101/gad.1384005.
6
Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways.
Genes Dev. 2004 Jul 15;18(14):1655-66. doi: 10.1101/gad.1210204. Epub 2004 Jul 1.
7
Slicer function of Drosophila Argonautes and its involvement in RISC formation.
Genes Dev. 2005 Dec 1;19(23):2837-48. doi: 10.1101/gad.1370605. Epub 2005 Nov 14.
8
The N domain of Argonaute drives duplex unwinding during RISC assembly.
Nat Struct Mol Biol. 2012 Jan 10;19(2):145-51. doi: 10.1038/nsmb.2232.
9
Native gel analysis for RISC assembly.
Methods Mol Biol. 2011;725:91-105. doi: 10.1007/978-1-61779-046-1_7.
10
Translation repression in human cells by microRNA-induced gene silencing requires RCK/p54.
PLoS Biol. 2006 Jul;4(7):e210. doi: 10.1371/journal.pbio.0040210.

引用本文的文献

1
MicroRNA: unveiling novel mechanistic and theranostic pathways in diabetic cardiomyopathy.
Front Pharmacol. 2025 Jul 23;16:1613844. doi: 10.3389/fphar.2025.1613844. eCollection 2025.
2
The role of non-coding RNAs in the regulation of cell death pathways in melanoma.
Discov Oncol. 2025 Jun 11;16(1):1063. doi: 10.1007/s12672-025-02888-3.
4
MicroRNA nanoformulation: a promising approach to anti-tumour activity.
Invest New Drugs. 2025 May 14. doi: 10.1007/s10637-025-01534-7.
5
Decoding microRNA arm switching: a key to evolutionary innovation and gene regulation.
Cell Mol Life Sci. 2025 May 10;82(1):197. doi: 10.1007/s00018-025-05663-3.
7
MicroRNAs' Significance in Retinoblastoma Diagnosis and Treatment: The Little Heroes.
Biochem Genet. 2025 Apr;63(2):1176-1197. doi: 10.1007/s10528-024-10976-2. Epub 2025 Jan 25.
8
A guide to the biogenesis and functions of endogenous small non-coding RNAs in animals.
Nat Rev Mol Cell Biol. 2025 May;26(5):347-370. doi: 10.1038/s41580-024-00818-9. Epub 2025 Jan 24.
9
MiRNAs as major players in brain health and disease: current knowledge and future perspectives.
Cell Death Discov. 2025 Jan 13;11(1):7. doi: 10.1038/s41420-024-02283-x.
10
Emerging role of small RNAs in inflammatory bowel disease and associated colorectal cancer (Review).
Int J Mol Med. 2025 Feb;55(2). doi: 10.3892/ijmm.2024.5474. Epub 2024 Dec 20.

本文引用的文献

1
Structural determinants of miRNAs for RISC loading and slicer-independent unwinding.
Nat Struct Mol Biol. 2009 Sep;16(9):953-60. doi: 10.1038/nsmb.1630. Epub 2009 Aug 16.
3
Drosophila argonaute1 and argonaute2 employ distinct mechanisms for translational repression.
Mol Cell. 2009 Apr 10;34(1):58-67. doi: 10.1016/j.molcel.2009.02.010. Epub 2009 Mar 5.
4
Origins and Mechanisms of miRNAs and siRNAs.
Cell. 2009 Feb 20;136(4):642-55. doi: 10.1016/j.cell.2009.01.035.
5
Essential and overlapping functions for mammalian Argonautes in microRNA silencing.
Genes Dev. 2009 Feb 1;23(3):304-17. doi: 10.1101/gad.1749809. Epub 2009 Jan 27.
6
On the road to reading the RNA-interference code.
Nature. 2009 Jan 22;457(7228):396-404. doi: 10.1038/nature07754.
7
Small silencing RNAs: an expanding universe.
Nat Rev Genet. 2009 Feb;10(2):94-108. doi: 10.1038/nrg2504.
9
Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing.
Proc Natl Acad Sci U S A. 2008 Jun 10;105(23):7964-9. doi: 10.1073/pnas.0800334105. Epub 2008 Jun 4.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验