Department of Molecular Biology and Biochemical Engineering, Pablo de Olavide University, Ctra. Utrera km 1, 41013 Seville, Spain.
Mol Ecol. 2010 Jan;19(2):352-70. doi: 10.1111/j.1365-294X.2009.04449.x. Epub 2009 Dec 9.
Coastal plants are ideal models for studying the colonization routes of species because of the simple linear distributions of these species. Carex extensa occurs mainly in salt marshes along the Mediterranean and European coasts. Variation in cpDNA sequences, amplified fragment length polymorphisms (AFLPs) and simple sequence repeats (SSRs) of 24 populations were analysed to reconstruct its colonization history. Phylogenetic relationships indicate that C. extensa together with the South American Carex vixdentata and the southern African Carex ecklonii form a monophyletic group of halophilic species. Analyses of divergence times suggest that early lineage diversification may have occurred between the late Miocene and the late Pliocene (Messinian crisis). Phylogenetic and network analyses of cpDNA variation revealed the monophyly of the species and an ancestral haplotype contained in populations of the eastern Mediterranean. The AFLP and SSR analyses support a pattern of variation compatible with these two lineages. These analyses also show higher levels of genetic diversity and differentiation in the eastern population group, which underwent an east-to-west Mediterranean colonization. Quaternary climatic oscillations appear to have been responsible for the split between these two lineages. Secondary contacts may have taken place in areas near the Ligurian Sea in agreement with the gene flow detected in Corsican populations. The AFLP and SSR data accord with the 'tabula rasa' hypothesis in which a recent and rapid colonization of northern Europe took place from the western Mediterranean after the Last Glacial Maximum. The unbalanced west-east vs. west-north colonization may be as a result of 'high density blocking' effect.
滨海植物是研究物种定居途径的理想模式生物,因为这些物种的分布呈简单的线性。大穗薹草主要分布在地中海和欧洲沿海的盐沼中。对 24 个种群的 cpDNA 序列、扩增片段长度多态性(AFLPs)和简单重复序列(SSRs)的变异进行了分析,以重建其定居历史。系统发育关系表明,C. extensa 与南美洲的 C. vixdentata 和南部非洲的 C. ecklonii 一起形成了一个嗜盐物种的单系群。分化时间分析表明,早期谱系多样化可能发生在中新世晚期到上新世晚期(墨西拿期危机)之间。cpDNA 变异的系统发育和网络分析揭示了物种的单系性,以及东部地中海种群中包含的祖先单倍型。AFLP 和 SSR 分析支持这两个谱系的变异模式。这些分析还表明,东部种群群体具有更高水平的遗传多样性和分化,经历了从东向西的地中海定居。第四纪气候振荡似乎是这两个谱系分裂的原因。与在科西嘉种群中检测到的基因流一致,在利古里亚海附近的地区可能发生了二次接触。AFLP 和 SSR 数据与“白板”假说一致,即在末次冰盛期后,从西部地中海向北欧发生了最近和快速的殖民化。不平衡的东西向与西-北向的殖民化可能是由于“高密度阻塞”效应。