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乳香精油处理 Lewis 肺癌的转录组计算分析揭示了靶向肿瘤细胞生长和存活的分子机制。

A transcriptomic computational analysis of mastic oil-treated Lewis lung carcinomas reveals molecular mechanisms targeting tumor cell growth and survival.

机构信息

Institute of Biological Research and Biotechnology, National Hellenic Research Foundation, Athens, Greece.

出版信息

BMC Med Genomics. 2009 Dec 15;2:68. doi: 10.1186/1755-8794-2-68.

Abstract

BACKGROUND

Mastic oil from Pistacia lentiscus variation chia, a blend of bioactive terpenes with recognized medicinal properties, has been recently shown to exert anti-tumor growth activity through inhibition of cancer cell proliferation, survival, angiogenesis and inflammatory response. However, no studies have addressed its mechanisms of action at genome-wide gene expression level.

METHODS

To investigate molecular mechanisms triggered by mastic oil, Lewis Lung Carcinoma cells were treated with mastic oil or DMSO and RNA was collected at five distinct time points (3-48 h). Microarray expression profiling was performed using Illumina mouse-6 v1 beadchips, followed by computational analysis. For a number of selected genes, RT-PCR validation was performed in LLC cells as well as in three human cancer cell lines of different origin (A549, HCT116, K562). PTEN specific inhibition by a bisperovanadium compound was applied to validate its contribution to mastic oil-mediated anti-tumor growth effects.

RESULTS

In this work we demonstrated that exposure of Lewis lung carcinomas to mastic oil caused a time-dependent alteration in the expression of 925 genes. GO analysis associated expression profiles with several biological processes and functions. Among them, modifications on cell cycle/proliferation, survival and NF-kappaB cascade in conjunction with concomitant regulation of genes encoding for PTEN, E2F7, HMOX1 (up-regulation) and NOD1 (down-regulation) indicated some important mechanistic links underlying the anti-proliferative, pro-apoptotic and anti-inflammatory effects of mastic oil. The expression profiles of Hmox1, Pten and E2f7 genes were similarly altered by mastic oil in the majority of test cancer cell lines. Inhibition of PTEN partially reversed mastic oil effects on tumor cell growth, indicating a multi-target mechanism of action. Finally, k-means clustering, organized the significant gene list in eight clusters demonstrating a similar expression profile. Promoter analysis in a representative cluster revealed shared putative cis-elements suggesting a common regulatory transcription mechanism.

CONCLUSIONS

Present results provide novel evidence on the molecular basis of tumor growth inhibition mediated by mastic oil and set a rational basis for application of genomics and bioinformatic methodologies in the screening of natural compounds with potential cancer chemopreventive activities.

摘要

背景

乳香精油来自乳香黄连木变种,是一种混合了具有公认药用特性的生物活性萜烯,最近已被证明通过抑制癌细胞增殖、存活、血管生成和炎症反应来发挥抗肿瘤生长活性。然而,没有研究在全基因组基因表达水平上探讨其作用机制。

方法

为了研究乳香精油触发的分子机制,用乳香精油或 DMSO 处理 Lewis 肺癌细胞,并在五个不同时间点(3-48 h)收集 RNA。使用 Illumina 小鼠-6 v1 珠芯片进行微阵列表达谱分析,然后进行计算分析。对于一些选定的基因,在 LLC 细胞以及三种不同来源的人类癌细胞系(A549、HCT116、K562)中进行 RT-PCR 验证。应用双过钒化合物特异性抑制 PTEN 以验证其对乳香油介导的抗肿瘤生长作用的贡献。

结果

在这项工作中,我们证明了乳香油暴露于 Lewis 肺癌会导致 925 个基因的表达随时间发生依赖性改变。GO 分析将表达谱与几种生物过程和功能相关联。其中,细胞周期/增殖、存活和 NF-kappaB 级联的改变,以及对编码 PTEN、E2F7、HMOX1(上调)和 NOD1(下调)的基因的同时调控,表明了乳香油抗增殖、促凋亡和抗炎作用的一些重要机制联系。在大多数测试的癌细胞系中,乳香油也会改变 Hmox1、Pten 和 E2f7 基因的表达谱。PTEN 抑制部分逆转了乳香油对肿瘤细胞生长的作用,表明其具有多靶点作用机制。最后,k-均值聚类将显著基因列表组织成八个聚类,显示出相似的表达谱。在一个代表性聚类的启动子分析中发现了共享的假定顺式元件,表明存在共同的调节转录机制。

结论

目前的结果为乳香油介导的肿瘤生长抑制的分子基础提供了新的证据,并为应用基因组学和生物信息学方法筛选具有潜在癌症化学预防活性的天然化合物奠定了合理的基础。

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