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1
Monte Carlo simulation of mechanical unfolding of proteins based on a simple two-state model.
Int J Biol Macromol. 2010 Mar 1;46(2):159-66. doi: 10.1016/j.ijbiomac.2009.12.001. Epub 2009 Dec 23.
2
How do chemical denaturants affect the mechanical folding and unfolding of proteins?
J Mol Biol. 2008 Jan 4;375(1):316-24. doi: 10.1016/j.jmb.2007.10.024. Epub 2007 Oct 15.
3
A simple method for probing the mechanical unfolding pathway of proteins in detail.
Proc Natl Acad Sci U S A. 2002 Sep 17;99(19):12143-8. doi: 10.1073/pnas.192351899. Epub 2002 Sep 6.
4
Mapping the energy landscape of biomolecules using single molecule force correlation spectroscopy: theory and applications.
Biophys J. 2006 Jun 1;90(11):3827-41. doi: 10.1529/biophysj.105.075937. Epub 2006 Mar 13.
5
Monte Carlo simulation for single RNA unfolding by force.
Biophys J. 2005 Jan;88(1):76-84. doi: 10.1529/biophysj.104.049239. Epub 2004 Oct 22.
7
Maximum likelihood estimation of protein kinetic parameters under weak assumptions from unfolding force spectroscopy experiments.
Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Dec;80(6 Pt 1):061916. doi: 10.1103/PhysRevE.80.061916. Epub 2009 Dec 23.
8
Optimizing the calculation of energy landscape parameters from single-molecule protein unfolding experiments.
Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Jan;91(1):012710. doi: 10.1103/PhysRevE.91.012710. Epub 2015 Jan 26.
10
Theoretical studies of the kinetics of mechanical unfolding of cross-linked polymer chains and their implications for single-molecule pulling experiments.
Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Feb;71(2 Pt 1):021904. doi: 10.1103/PhysRevE.71.021904. Epub 2005 Feb 11.

引用本文的文献

1
Measuring biological materials mechanics with atomic force microscopy - Mechanical unfolding of biopolymers.
Microsc Res Tech. 2022 Aug;85(8):3025-3036. doi: 10.1002/jemt.24136. Epub 2022 May 2.
2
Understanding the Adhesion Mechanism of Hydroxyapatite-Binding Peptide.
Langmuir. 2022 Jan 25;38(3):968-978. doi: 10.1021/acs.langmuir.1c02293. Epub 2022 Jan 7.
3
Next Generation Methods for Single-Molecule Force Spectroscopy on Polyproteins and Receptor-Ligand Complexes.
Front Mol Biosci. 2020 May 19;7:85. doi: 10.3389/fmolb.2020.00085. eCollection 2020.
4
A flexible nanoarray approach for the assembly and probing of molecular complexes.
Biophys J. 2015 May 5;108(9):2333-9. doi: 10.1016/j.bpj.2015.03.040.
5
Nonkinetic modeling of the mechanical unfolding of multimodular proteins: theory and experiments.
Biophys J. 2011 Sep 21;101(6):1504-12. doi: 10.1016/j.bpj.2011.07.047. Epub 2011 Sep 20.

本文引用的文献

1
Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions.
Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2677-82. doi: 10.1073/pnas.0813249106. Epub 2009 Feb 2.
2
Model for stretching and unfolding the giant multidomain muscle protein using single-molecule force spectroscopy.
Phys Rev Lett. 2008 Dec 12;101(24):248301. doi: 10.1103/PhysRevLett.101.248301. Epub 2008 Dec 8.
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In singulo biochemistry: when less is more.
Annu Rev Biochem. 2008;77:45-50. doi: 10.1146/annurev.biochem.012108.120952.
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Single-molecule unfolding force distributions reveal a funnel-shaped energy landscape.
Biophys J. 2006 Feb 15;90(4):L33-5. doi: 10.1529/biophysj.105.077982. Epub 2005 Dec 16.
6
Reversible mechanical unfolding of single ubiquitin molecules.
Biophys J. 2004 Dec;87(6):3995-4006. doi: 10.1529/biophysj.104.042754. Epub 2004 Sep 10.
7
The mechanical stability of ubiquitin is linkage dependent.
Nat Struct Biol. 2003 Sep;10(9):738-43. doi: 10.1038/nsb965. Epub 2003 Aug 17.
9
A simple method for probing the mechanical unfolding pathway of proteins in detail.
Proc Natl Acad Sci U S A. 2002 Sep 17;99(19):12143-8. doi: 10.1073/pnas.192351899. Epub 2002 Sep 6.
10
Using mechanical force to probe the mechanism of pausing and arrest during continuous elongation by Escherichia coli RNA polymerase.
Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11682-7. doi: 10.1073/pnas.142417799. Epub 2002 Aug 22.

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