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Yeast Dxo1 is required for 25S rRNA maturation and acts as a transcriptome-wide distributive exonuclease.酵母 Dxo1 对于 25S rRNA 的成熟是必需的,并作为转录组范围内分布的外切核酸酶发挥作用。
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本文引用的文献

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The many pathways of RNA degradation.RNA降解的多种途径。
Cell. 2009 Feb 20;136(4):763-76. doi: 10.1016/j.cell.2009.01.019.
2
The exonuclease ERI-1 has a conserved dual role in 5.8S rRNA processing and RNAi.核酸外切酶ERI-1在5.8S核糖体RNA加工和RNA干扰过程中具有保守的双重作用。
Nat Struct Mol Biol. 2008 May;15(5):531-3. doi: 10.1038/nsmb.1411. Epub 2008 Apr 27.
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Mouse Eri1 interacts with the ribosome and catalyzes 5.8S rRNA processing.小鼠Eri1与核糖体相互作用并催化5.8S rRNA加工。
Nat Struct Mol Biol. 2008 May;15(5):523-30. doi: 10.1038/nsmb.1417. Epub 2008 Apr 27.
4
Arx1 functions as an unorthodox nuclear export receptor for the 60S preribosomal subunit.Arx1作为60S核糖体亚基前体的一种非传统核输出受体发挥作用。
Mol Cell. 2007 Sep 7;27(5):767-79. doi: 10.1016/j.molcel.2007.06.034.
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Cytoplasmic recycling of 60S preribosomal factors depends on the AAA protein Drg1.60S核糖体前体因子的细胞质循环依赖于AAA蛋白Drg1。
Mol Cell Biol. 2007 Oct;27(19):6581-92. doi: 10.1128/MCB.00668-07. Epub 2007 Jul 23.
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Nuclear export of ribosomal 60S subunits by the general mRNA export receptor Mex67-Mtr2.核糖体60S亚基通过通用mRNA输出受体Mex67-Mtr2进行核输出。
Mol Cell. 2007 Apr 13;26(1):51-62. doi: 10.1016/j.molcel.2007.02.018.
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A functional network involved in the recycling of nucleocytoplasmic pre-60S factors.一个参与核质前60S因子循环利用的功能网络。
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8
Nuclear recycling of the pre-60S ribosomal subunit-associated factor Arx1 depends on Rei1 in Saccharomyces cerevisiae.酿酒酵母中,与60S核糖体亚基前体相关的因子Arx1的核循环依赖于Rei1。
Mol Cell Biol. 2006 May;26(10):3718-27. doi: 10.1128/MCB.26.10.3718-3727.2006.
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Yeast Trf5p is a nuclear poly(A) polymerase.酵母Trf5p是一种核聚腺苷酸聚合酶。
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Dramatically improved RNA in situ hybridization signals using LNA-modified probes.使用锁核酸(LNA)修饰的探针显著改善了RNA原位杂交信号。
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在酿酒酵母中,5.8S rRNA 加工的最后一步发生在细胞质中。

The final step in 5.8S rRNA processing is cytoplasmic in Saccharomyces cerevisiae.

机构信息

Wellcome Trust Centre for Cell Biology, University of Edinburgh, Edinburgh EH9 3JR, Scotland, UK.

出版信息

Mol Cell Biol. 2010 Feb;30(4):976-84. doi: 10.1128/MCB.01359-09. Epub 2009 Dec 14.

DOI:10.1128/MCB.01359-09
PMID:20008552
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2815566/
Abstract

The 18S rRNA component of yeast (Saccharomyces cerevisiae) 40S ribosomes undergoes cytoplasmic 3' cleavage following nuclear export, whereas exported pre-60S subunits were believed to contain only mature 5.8S and 25S rRNAs. However, in situ hybridization detected 3'-extended forms of 5.8S rRNA in the cytoplasm, which were lost when Crm1-dependent preribosome export was blocked by treatment with leptomycin B (LMB). LMB treatment rapidly blocked processing of 6S pre-rRNA to 5.8S rRNA, leading to TRAMP-dependent pre-rRNA degradation. The 6S pre-rRNA was coprecipitated with the 60S export adapter Nmd3 and cytoplasmic 60S synthesis factor Lsg1. The longer 5.8S+30 pre-rRNA (a form of 5.8S rRNA 3' extended by approximately 30 nucleotides) is processed to 6S by the nuclear exonuclease Rrp6, and nuclear pre-rRNA accumulated in the absence of Rrp6. In contrast, 6S to 5.8S processing requires the cytoplasmic exonuclease Ngl2, and cytoplasmic pre-rRNA accumulated in strains lacking Ngl2. We conclude that nuclear pre-60S particles containing the 6S pre-rRNA bind Nmd3 and Crm1 and are exported to the cytoplasm prior to final maturation by Ngl2.

摘要

酵母(酿酒酵母)40S 核糖体的 18S rRNA 成分在核输出后经历细胞质 3' 切割,而出口的前 60S 亚基被认为仅含有成熟的 5.8S 和 25S rRNA。然而,原位杂交在细胞质中检测到 5.8S rRNA 的 3' 延伸形式,当用莱普霉素 B(LMB)阻断 Crm1 依赖性前核糖体出口时,这些形式会丢失。LMB 处理迅速阻断了 6S 前 rRNA 向 5.8S rRNA 的加工,导致 TRAMP 依赖性前 rRNA 降解。6S 前 rRNA 与 60S 出口适配器 Nmd3 和细胞质 60S 合成因子 Lsg1 共沉淀。较长的 5.8S+30 前 rRNA(5.8S rRNA 的 3' 延伸约 30 个核苷酸的一种形式)被核外切酶 Rrp6 加工成 6S,并且在没有 Rrp6 的情况下核前 rRNA 积累。相比之下,6S 到 5.8S 的加工需要细胞质外切酶 Ngl2,并且在缺乏 Ngl2 的菌株中细胞质前 rRNA 积累。我们得出结论,含有 6S 前 rRNA 的核前 60S 颗粒与 Nmd3 和 Crm1 结合,并在 Ngl2 进行最终成熟之前被出口到细胞质。