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本文引用的文献

1
Functional evolution of cis-regulatory modules at a homeotic gene in Drosophila.果蝇同源异型基因顺式调控模块的功能进化。
PLoS Genet. 2009 Nov;5(11):e1000709. doi: 10.1371/journal.pgen.1000709. Epub 2009 Nov 6.
2
Evolving enhancer-promoter interactions within the tinman complex of the flour beetle, Tribolium castaneum.赤拟谷盗锡兵复合体中不断演变的增强子-启动子相互作用。
Development. 2009 Sep;136(18):3153-60. doi: 10.1242/dev.038034.
3
Enhancer-promoter communication at the Drosophila engrailed locus.果蝇 engrailed 基因座处的增强子 - 启动子通讯
Development. 2009 Sep;136(18):3067-75. doi: 10.1242/dev.036426. Epub 2009 Aug 12.
4
A chromatin insulator mediates transgene homing and very long-range enhancer-promoter communication.一种染色质绝缘子介导转基因归巢以及极远距离的增强子-启动子通讯。
Development. 2009 Sep;136(18):3077-87. doi: 10.1242/dev.036467. Epub 2009 Aug 12.
5
Big genomes facilitate the comparative identification of regulatory elements.大型基因组有助于调控元件的比较识别。
PLoS One. 2009;4(3):e4688. doi: 10.1371/journal.pone.0004688. Epub 2009 Mar 4.
6
ChIP-seq accurately predicts tissue-specific activity of enhancers.染色质免疫沉淀测序(ChIP-seq)能准确预测增强子的组织特异性活性。
Nature. 2009 Feb 12;457(7231):854-8. doi: 10.1038/nature07730.
7
A closer look at the eve stripe 2 enhancers of Drosophila and Themira.深入研究果蝇和Themira的第2条eve条纹增强子。
PLoS Genet. 2008 Nov;4(11):e1000276. doi: 10.1371/journal.pgen.1000276. Epub 2008 Nov 28.
8
A careful look at binding site reorganization in the even-skipped enhancers of Drosophila and sepsids.仔细观察果蝇和脓蝇偶数条纹增强子中的结合位点重组。
PLoS Genet. 2008 Nov;4(11):e1000268. doi: 10.1371/journal.pgen.1000268. Epub 2008 Nov 28.
9
Evolution acts on enhancer organization to fine-tune gradient threshold readouts.进化作用于增强子组织,以微调梯度阈值读数。
PLoS Biol. 2008 Nov 4;6(11):e263. doi: 10.1371/journal.pbio.0060263.
10
Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif.由GATA1占据的DNA片段所介导的转录增强作用与结合位点基序上的进化限制密切相关。
Genome Res. 2008 Dec;18(12):1896-905. doi: 10.1101/gr.083089.108. Epub 2008 Sep 25.

解析发育的调控开关:来自果蝇增强子进化的启示。

Dissecting the regulatory switches of development: lessons from enhancer evolution in Drosophila.

机构信息

Biology Department, Harvey Mudd College, 301 Platt Boulevard, Claremont, CA 91711, USA.

出版信息

Development. 2010 Jan;137(1):5-13. doi: 10.1242/dev.036160.

DOI:10.1242/dev.036160
PMID:20023155
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2796927/
Abstract

Cis-regulatory modules are non-protein-coding regions of DNA essential for the control of gene expression. One class of regulatory modules is embryonic enhancers, which drive gene expression during development as a result of transcription factor protein binding at the enhancer sequences. Recent comparative studies have begun to investigate the evolution of the sequence architecture within enhancers. These analyses are illuminating the way that developmental biologists think about enhancers by revealing their molecular mechanism of function.

摘要

顺式调控模块是 DNA 中非编码蛋白的区域,对于基因表达的调控至关重要。调控模块的一类是胚胎增强子,它通过转录因子蛋白在增强子序列上的结合,在发育过程中驱动基因表达。最近的比较研究开始研究增强子中序列结构的进化。这些分析通过揭示增强子的分子功能机制,为发育生物学家思考增强子提供了新的视角。