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Next-generation sequencing.下一代测序。
Breast Cancer Res. 2009;11 Suppl 3(Suppl 3):S12. doi: 10.1186/bcr2431. Epub 2009 Dec 18.
2
[Cancer genome analysis through next-generation sequencing].通过下一代测序进行癌症基因组分析
Gan To Kagaku Ryoho. 2011 Jan;38(1):1-6.
3
The complete genome of an individual by massively parallel DNA sequencing.通过大规模平行DNA测序获得个体的完整基因组。
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Long-range massively parallel mate pair sequencing detects distinct mutations and similar patterns of structural mutability in two breast cancer cell lines.长程大规模平行配对末端测序检测出两种乳腺癌细胞系中的不同突变和相似的结构易变模式。
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The Cancer Genome Atlas: clinical applications for breast cancer.癌症基因组图谱:乳腺癌的临床应用。
Oncology (Williston Park). 2013 Dec;27(12):1263-9, 1274-9.
6
Exploring the cancer genome in the era of next-generation sequencing.探索下一代测序时代的癌症基因组。
Front Med. 2012 Mar;6(1):48-55. doi: 10.1007/s11684-012-0182-x. Epub 2012 Mar 31.
7
Comprehensive genomic sequencing and the molecular profiles of clinically advanced breast cancer.临床晚期乳腺癌的综合基因组测序与分子图谱
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Next-generation DNA sequencing methods.下一代DNA测序方法。
Annu Rev Genomics Hum Genet. 2008;9:387-402. doi: 10.1146/annurev.genom.9.081307.164359.
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Advantages of next-generation sequencing versus the microarray in epigenetic research.在表观遗传学研究中,新一代测序相对于微阵列的优势。
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Comprehensive next-generation cancer genome sequencing in the era of targeted therapy and personalized oncology.在靶向治疗和肿瘤个体化治疗时代进行全面的下一代癌症基因组测序。
Biomark Med. 2011 Jun;5(3):293-305. doi: 10.2217/bmm.11.37.

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本文引用的文献

1
Histological and molecular types of breast cancer: is there a unifying taxonomy?乳腺癌的组织学和分子类型:是否存在统一的分类法?
Nat Rev Clin Oncol. 2009 Dec;6(12):718-30. doi: 10.1038/nrclinonc.2009.166.
2
Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution.在单核苷酸分辨率下分析的小叶型乳腺肿瘤中的突变进化。
Nature. 2009 Oct 8;461(7265):809-13. doi: 10.1038/nature08489.
3
Genetic characterization of breast cancer and implications for clinical management.乳腺癌的遗传学特征及其对临床管理的影响。
J Cell Mol Med. 2009 Oct;13(10):4090-103. doi: 10.1111/j.1582-4934.2009.00906.x. Epub 2009 Sep 14.
4
Personalized copy number and segmental duplication maps using next-generation sequencing.使用下一代测序技术构建个性化拷贝数和片段重复图谱。
Nat Genet. 2009 Oct;41(10):1061-7. doi: 10.1038/ng.437. Epub 2009 Aug 30.
5
Targeted capture and massively parallel sequencing of 12 human exomes.12个人类外显子组的靶向捕获和大规模平行测序
Nature. 2009 Sep 10;461(7261):272-6. doi: 10.1038/nature08250. Epub 2009 Aug 16.
6
Massively parallel sequencing: the next big thing in genetic medicine.大规模平行测序:基因医学的下一个重大突破。
Am J Hum Genet. 2009 Aug;85(2):142-54. doi: 10.1016/j.ajhg.2009.06.022.
7
Recurring mutations found by sequencing an acute myeloid leukemia genome.通过对急性髓系白血病基因组进行测序发现的复发性突变。
N Engl J Med. 2009 Sep 10;361(11):1058-66. doi: 10.1056/NEJMoa0903840. Epub 2009 Aug 5.
8
Acquired copy number alterations in adult acute myeloid leukemia genomes.成人急性髓系白血病基因组中获得性拷贝数改变
Proc Natl Acad Sci U S A. 2009 Aug 4;106(31):12950-5. doi: 10.1073/pnas.0903091106. Epub 2009 Jul 27.
9
Mucinous and neuroendocrine breast carcinomas are transcriptionally distinct from invasive ductal carcinomas of no special type.黏液性和神经内分泌乳腺癌在转录上与非特殊型浸润性导管癌不同。
Mod Pathol. 2009 Nov;22(11):1401-14. doi: 10.1038/modpathol.2009.112. Epub 2009 Jul 24.
10
Chimeric transcript discovery by paired-end transcriptome sequencing.通过双末端转录组测序发现嵌合转录本
Proc Natl Acad Sci U S A. 2009 Jul 28;106(30):12353-8. doi: 10.1073/pnas.0904720106. Epub 2009 Jul 10.

下一代测序。

Next-generation sequencing.

机构信息

Molecular Pathology Team, The Breakthrough Breast Cancer Research Centre, Institute of Cancer Research, 237 Fulham Road, London SW3 6JB, UK.

出版信息

Breast Cancer Res. 2009;11 Suppl 3(Suppl 3):S12. doi: 10.1186/bcr2431. Epub 2009 Dec 18.

DOI:10.1186/bcr2431
PMID:20030863
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2797692/
Abstract

Next-generation sequencing (also known as massively parallel sequencing) technologies are revolutionising our ability to characterise cancers at the genomic, transcriptomic and epigenetic levels. Cataloguing all mutations, copy number aberrations and somatic rearrangements in an entire cancer genome at base pair resolution can now be performed in a matter of weeks. Furthermore, massively parallel sequencing can be used as a means for unbiased transcriptomic analysis of mRNAs, small RNAs and noncoding RNAs, genome-wide methylation assays and high-throughput chromatin immunoprecipitation assays. Here, I discuss the potential impact of this technology on breast cancer research and the challenges that come with this technological breakthrough.

摘要

下一代测序(也称为大规模平行测序)技术正在彻底改变我们在基因组、转录组和表观基因组水平上描述癌症的能力。现在,我们可以在数周内以碱基对分辨率对整个癌症基因组中的所有突变、拷贝数异常和体细胞重排进行编目。此外,大规模平行测序可用于对 mRNA、小 RNA 和非编码 RNA 进行无偏转录组分析、进行全基因组甲基化测定和高通量染色质免疫沉淀测定。在这里,我将讨论这项技术对乳腺癌研究的潜在影响,以及这项技术突破所带来的挑战。