Suppr超能文献

生命的基本繁殖率。

The basic reproductive ratio of life.

机构信息

Program for Evolutionary Dynamics, Harvard University, Cambridge, MA 02138, USA.

出版信息

J Theor Biol. 2010 Apr 7;263(3):317-27. doi: 10.1016/j.jtbi.2009.12.020. Epub 2009 Dec 23.

Abstract

Template-directed polymerization of nucleotides is believed to be a pathway for the replication of genetic material in the earliest cells. We assume that activated monomers are produced by prebiotic chemistry. These monomers can undergo spontaneous polymerization, a system that we call "prelife." Adding template-directed polymerization changes the equilibrium structure of prelife if the rate constants meet certain criteria. In particular, if the basic reproductive ratio of sequences of a certain length exceeds one, then those sequences can attain high abundance. Furthermore, if many sequences replicate, then the longest sequences can reach high abundance even if the basic reproductive ratios of all sequences are less than one. We call this phenomenon "subcritical life." Subcritical life suggests that sequences long enough to be ribozymes can become abundant even if replication is relatively inefficient. Our work on the evolution of replication has interesting parallels to infection dynamics. Life (replication) can be seen as an infection of prelife.

摘要

核苷酸的模板指导聚合被认为是最早细胞中遗传物质复制的一种途径。我们假设激活的单体是由前生物化学产生的。这些单体可以自发聚合,我们称之为“前生命”。如果速率常数满足某些标准,添加模板指导聚合会改变前生命的平衡结构。特别是,如果特定长度序列的基本繁殖率超过 1,那么这些序列可以达到高丰度。此外,如果许多序列进行复制,那么即使所有序列的基本繁殖率都小于 1,最长的序列也可以达到高丰度。我们将这种现象称为“亚临界生命”。亚临界生命表明,即使复制效率相对较低,只要足够长的序列可以成为核酶,它们就可以变得丰富。我们对复制进化的研究与感染动力学有有趣的相似之处。生命(复制)可以被看作是前生命的一种感染。

相似文献

1
The basic reproductive ratio of life.生命的基本繁殖率。
J Theor Biol. 2010 Apr 7;263(3):317-27. doi: 10.1016/j.jtbi.2009.12.020. Epub 2009 Dec 23.
2
Originator dynamics.发起者动态
J Theor Biol. 2009 Feb 21;256(4):586-95. doi: 10.1016/j.jtbi.2008.10.006. Epub 2008 Oct 21.
3
Prelife catalysts and replicators.生命起源前的催化剂和复制因子。
Proc Biol Sci. 2009 Nov 7;276(1674):3783-90. doi: 10.1098/rspb.2009.1136. Epub 2009 Aug 19.
5
Prevolutionary dynamics and the origin of evolution.进化前的动力学与进化的起源。
Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14924-7. doi: 10.1073/pnas.0806714105. Epub 2008 Sep 12.
7
Biological Polymers: Evolution, Function, and Significance.生物聚合物:进化、功能及意义
Acc Chem Res. 2025 Mar 4;58(5):659-672. doi: 10.1021/acs.accounts.4c00546. Epub 2025 Feb 5.
9
A cross-chiral RNA polymerase ribozyme.一种交叉手性RNA聚合酶核酶。
Nature. 2014 Nov 20;515(7527):440-2. doi: 10.1038/nature13900. Epub 2014 Oct 29.

引用本文的文献

2
Co-operation between Polymerases and Nucleotide Synthetases in the RNA World.RNA世界中聚合酶与核苷酸合成酶之间的协作。
PLoS Comput Biol. 2016 Nov 7;12(11):e1005161. doi: 10.1371/journal.pcbi.1005161. eCollection 2016 Nov.
3
The RNA World: molecular cooperation at the origins of life.RNA 世界:生命起源处的分子协作。
Nat Rev Genet. 2015 Jan;16(1):7-17. doi: 10.1038/nrg3841. Epub 2014 Nov 11.
8
Can mathematics explain the evolution of human language?数学能解释人类语言的演变吗?
Commun Integr Biol. 2011 Sep;4(5):516-20. doi: 10.4161/cib.4.5.16426. Epub 2011 Sep 1.

本文引用的文献

1
Expanding the reaction scope of DNA-templated synthesis.拓展DNA模板合成的反应范围。
Angew Chem Int Ed Engl. 2002 May 17;41(10):1796-800. doi: 10.1002/1521-3773(20020517)41:10<1796::aid-anie1796>3.0.co;2-z.
2
Prelife catalysts and replicators.生命起源前的催化剂和复制因子。
Proc Biol Sci. 2009 Nov 7;276(1674):3783-90. doi: 10.1098/rspb.2009.1136. Epub 2009 Aug 19.
4
Self-sustained replication of an RNA enzyme.一种RNA酶的自我维持复制
Science. 2009 Feb 27;323(5918):1229-32. doi: 10.1126/science.1167856. Epub 2009 Jan 8.
5
Originator dynamics.发起者动态
J Theor Biol. 2009 Feb 21;256(4):586-95. doi: 10.1016/j.jtbi.2008.10.006. Epub 2008 Oct 21.
6
Evolution of solid phase homochirality for a proteinogenic amino acid.蛋白质原性氨基酸的固相同手性的演变。
J Am Chem Soc. 2008 Nov 19;130(46):15274-5. doi: 10.1021/ja8074506. Epub 2008 Oct 28.
7
Prevolutionary dynamics and the origin of evolution.进化前的动力学与进化的起源。
Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14924-7. doi: 10.1073/pnas.0806714105. Epub 2008 Sep 12.
8
Thermostability of model protocell membranes.模型原始细胞膜的热稳定性。
Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13351-5. doi: 10.1073/pnas.0805086105. Epub 2008 Sep 3.
10
On the chemistry and evolution of the pioneer organism.关于先驱生物体的化学性质与进化
Chem Biodivers. 2007 Apr;4(4):584-602. doi: 10.1002/cbdv.200790052.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验