Suppr超能文献

荧光传感器的响应和结合选择性的计算研究。

Computational studies on response and binding selectivity of fluorescence sensors.

机构信息

Department of Chemistry and Biochemistry, Southern Illinois University, Carbondale, Illinois 62901, USA.

出版信息

J Phys Chem B. 2010 Jan 21;114(2):870-6. doi: 10.1021/jp908368k.

Abstract

Using a computational strategy based on density functional theory calculations, we successfully designed a fluorescent sensor for detecting Zn(2+) [J. Phys. Chem. B 2006, 110, 22991-22994]. In this work, we report our further studies on the computational design protocol for developing Photoinduced Electron Transfer (PET) fluorescence sensors. This protocol was applied to design a PET fluorescence sensor for Zn(2+) ions, which consists of anthracene as the fluorophore connected to pyridine as the receptor through dimethylethanamine as the linker. B3LYP and time-dependent B3LYP calculations were performed with the basis set 6-31G(d,p), 6-31+G(d,p), 6-311G(d,p), and 6-311+G(d,p). The calculated HOMO and LUMO energies of the fluorophore and receptor using all four basis sets show that the relative energy levels remain unchanged. This indicates that any of these basis sets can be used in calculating the relative molecular orbital (MO) energy levels. Furthermore, the relative MO energies of the independent fluorophore and receptor are not altered when they are linked together, which suggests that one can calculate the MO energies of these components separately and use them as the MO energies of the free sensor. These are promising outcomes for the computational design of sensors, though more case studies are needed to further confirm these conclusions. The binding selectivity studies indicate that the predicted sensor can be used for Zn(2+) even in the presence of the divalent cation, Ca(2+).

摘要

我们使用基于密度泛函理论计算的计算策略,成功设计了一种用于检测 Zn(2+)的荧光传感器[J. Phys. Chem. B 2006, 110, 22991-22994]。在这项工作中,我们报告了我们在开发光诱导电子转移(PET)荧光传感器的计算设计方案方面的进一步研究。该方案应用于设计用于 Zn(2+)离子的 PET 荧光传感器,该传感器由蒽作为荧光团,通过二甲乙醇胺作为连接体连接到吡啶作为受体。使用基组 6-31G(d,p)、6-31+G(d,p)、6-311G(d,p)和 6-311+G(d,p)进行了 B3LYP 和含时 B3LYP 计算。使用所有四个基组计算荧光团和受体的 HOMO 和 LUMO 能量表明相对能级保持不变。这表明可以使用这些基组中的任何一个来计算相对分子轨道(MO)能级。此外,当将独立的荧光团和受体连接在一起时,它们的相对 MO 能级不会改变,这表明可以分别计算这些组件的 MO 能量并将其用作游离传感器的 MO 能量。尽管需要更多的案例研究来进一步证实这些结论,但这些结果为传感器的计算设计提供了有希望的结果。结合选择性研究表明,预测的传感器即使在存在二价阳离子 Ca(2+)的情况下也可用于 Zn(2+)。

相似文献

1
Computational studies on response and binding selectivity of fluorescence sensors.
J Phys Chem B. 2010 Jan 21;114(2):870-6. doi: 10.1021/jp908368k.
4
A new fluorescent probe for Zn²⁺ with red emission and its application in bioimaging.
Dalton Trans. 2014 Jun 7;43(21):8048-53. doi: 10.1039/c4dt00167b. Epub 2014 Apr 9.
5
Fluorescence sensors for Zn(2+) based on conjugated indole Schiff base.
Spectrochim Acta A Mol Biomol Spectrosc. 2015 Mar 5;138:603-8. doi: 10.1016/j.saa.2014.11.098. Epub 2014 Dec 11.
6
A highly selective quinoline-based fluorescent sensor for Zn(II).
Spectrochim Acta A Mol Biomol Spectrosc. 2014 Jan 24;118:883-7. doi: 10.1016/j.saa.2013.09.118. Epub 2013 Oct 8.
9
Mechanism of "turn-on" fluorescent sensors for mercury(II) in solution and its implications for ligand design.
Inorg Chem. 2012 Oct 15;51(20):10904-15. doi: 10.1021/ic301380w. Epub 2012 Sep 24.

引用本文的文献

1
New Calamitic Mesogens Exhibiting Aggregation-Induced Emission (AIE).
Materials (Basel). 2024 Jul 20;17(14):3587. doi: 10.3390/ma17143587.
2
Practical Guidance for Developing Small-Molecule Optical Probes for In Vivo Imaging.
Mol Imaging Biol. 2023 Feb;25(1):240-264. doi: 10.1007/s11307-023-01800-1. Epub 2023 Feb 6.
3
First-principles study of terpyrrole as a potential hydrogen cyanide sensor: DFT calculations.
J Mol Model. 2015 Oct;21(10):273. doi: 10.1007/s00894-015-2814-y. Epub 2015 Sep 29.

本文引用的文献

1
Performance of B3LYP Density Functional Methods for a Large Set of Organic Molecules.
J Chem Theory Comput. 2008 Feb;4(2):297-306. doi: 10.1021/ct700248k.
2
Theoretical investigation of the excited states of coumarin dyes for dye-sensitized solar cells.
J Phys Chem A. 2007 Jun 28;111(25):5544-8. doi: 10.1021/jp0720688. Epub 2007 Jun 1.
3
Photolysis of methylcobalamin: identification of the relevant excited states involved in Co-C bond scission.
J Phys Chem B. 2007 Mar 15;111(10):2419-22. doi: 10.1021/jp0685840. Epub 2007 Feb 20.
5
Computational prediction and experimental evaluation of a photoinduced electron-transfer sensor.
J Phys Chem B. 2006 Nov 23;110(46):22991-4. doi: 10.1021/jp065876s.
10
Design and synthesis of zinc-selective chelators for extracellular applications.
J Am Chem Soc. 2005 Jan 26;127(3):818-9. doi: 10.1021/ja044697q.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验