• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

量子飞跃中的进化:肠杆菌科中 HPI 和其他遗传模块的多次组合转移。

Evolution in quantum leaps: multiple combinatorial transfers of HPI and other genetic modules in Enterobacteriaceae.

机构信息

Department of Medical Microbiology, University Medical Centre Utrecht, Utrecht, The Netherlands.

出版信息

PLoS One. 2010 Jan 13;5(1):e8662. doi: 10.1371/journal.pone.0008662.

DOI:10.1371/journal.pone.0008662
PMID:20084283
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2801613/
Abstract

Horizontal gene transfer is a key step in the evolution of Enterobacteriaceae. By acquiring virulence determinants of foreign origin, commensals can evolve into pathogens. In Enterobacteriaceae, horizontal transfer of these virulence determinants is largely dependent on transfer by plasmids, phages, genomic islands (GIs) and genomic modules (GMs). The High Pathogenicity Island (HPI) is a GI encoding virulence genes that can be transferred between different Enterobacteriaceae. We investigated the HPI because it was present in an Enterobacter hormaechei outbreak strain (EHOS). Genome sequence analysis showed that the EHOS contained an integration site for mobile elements and harbored two GIs and three putative GMs, including a new variant of the HPI (HPI-ICEEh1). We demonstrate, for the first time, that combinatorial transfers of GIs and GMs between Enterobacter cloacae complex isolates must have occurred. Furthermore, the excision and circularization of several combinations of the GIs and GMs was demonstrated. Because of its flexibility, the multiple integration site of mobile DNA can be considered an integration hotspot (IHS) that increases the genomic plasticity of the bacterium. Multiple combinatorial transfers of diverse combinations of the HPI and other genomic elements among Enterobacteriaceae may accelerate the generation of new pathogenic strains.

摘要

水平基因转移是肠杆菌科进化的关键步骤。通过获得外来来源的毒力决定因素,共生菌可以进化为病原体。在肠杆菌科中,这些毒力决定因素的水平转移在很大程度上依赖于质粒、噬菌体、基因组岛 (GI) 和基因组模块 (GM) 的转移。高致病性岛 (HPI) 是一个 GI,编码可以在不同肠杆菌科之间转移的毒力基因。我们研究了 HPI,因为它存在于肠杆菌属 Hormaechei 爆发株 (EHOS) 中。基因组序列分析表明,EHOS 含有一个移动元件的整合位点,并且包含两个 GI 和三个推定的 GM,包括 HPI 的一个新变体 (HPI-ICEEh1)。我们首次证明,肠杆菌属 cloacae 复合菌株之间必须发生 GI 和 GM 的组合转移。此外,还证明了 GI 和 GM 的几种组合的切除和环化。由于其灵活性,移动 DNA 的多个整合位点可被视为整合热点 (IHS),增加了细菌的基因组可塑性。肠杆菌科中 HPI 和其他基因组元件的多种组合的多次组合转移可能会加速新致病菌株的产生。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/801bb491b2d0/pone.0008662.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/4c7919dbf188/pone.0008662.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/0561de942212/pone.0008662.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/6c1e7e154059/pone.0008662.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/0b61334b7a3f/pone.0008662.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/7c597c38a7ab/pone.0008662.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/801bb491b2d0/pone.0008662.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/4c7919dbf188/pone.0008662.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/0561de942212/pone.0008662.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/6c1e7e154059/pone.0008662.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/0b61334b7a3f/pone.0008662.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/7c597c38a7ab/pone.0008662.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b055/2801613/801bb491b2d0/pone.0008662.g006.jpg

相似文献

1
Evolution in quantum leaps: multiple combinatorial transfers of HPI and other genetic modules in Enterobacteriaceae.量子飞跃中的进化:肠杆菌科中 HPI 和其他遗传模块的多次组合转移。
PLoS One. 2010 Jan 13;5(1):e8662. doi: 10.1371/journal.pone.0008662.
2
Role of intraspecies recombination in the spread of pathogenicity islands within the Escherichia coli species.种内重组在致病性岛在大肠杆菌种内传播中的作用。
PLoS Pathog. 2009 Jan;5(1):e1000257. doi: 10.1371/journal.ppat.1000257. Epub 2009 Jan 9.
3
Identification of resistance and virulence factors in an epidemic Enterobacter hormaechei outbreak strain.一株流行的霍氏肠杆菌暴发菌株中耐药性和毒力因子的鉴定
Microbiology (Reading). 2009 May;155(Pt 5):1478-1488. doi: 10.1099/mic.0.024828-0. Epub 2009 Apr 16.
4
A novel integrative and conjugative element (ICE) of Escherichia coli: the putative progenitor of the Yersinia high-pathogenicity island.大肠杆菌的一种新型整合与接合元件(ICE):耶尔森氏菌高致病性岛的假定祖先。
Mol Microbiol. 2004 Feb;51(3):837-48. doi: 10.1046/j.1365-2958.2003.03870.x.
5
Comparative and phylogenetic analysis of a novel family of Enterobacteriaceae-associated genomic islands that share a conserved excision/integration module.肠杆菌科相关基因组岛新型家族的比较和系统发育分析,这些基因组岛具有保守的切除/整合模块。
Sci Rep. 2018 Jul 6;8(1):10292. doi: 10.1038/s41598-018-28537-0.
6
The Yersinia high-pathogenicity island (HPI): evolutionary and functional aspects.耶尔森氏菌高致病性岛(HPI):进化与功能方面
Int J Med Microbiol. 2004 Sep;294(2-3):83-94. doi: 10.1016/j.ijmm.2004.06.026.
7
Involvement of β-Carbonic Anhydrase Genes in Bacterial Genomic Islands and Their Horizontal Transfer to Protists.β-碳酸酐酶基因参与细菌基因组岛及其向原生生物的水平转移。
Appl Environ Microbiol. 2018 Jul 17;84(15). doi: 10.1128/AEM.00771-18. Print 2018 Aug 1.
8
Pathogenomics of mobile genetic elements of toxigenic bacteria.产毒细菌移动遗传元件的病原基因组学
Int J Med Microbiol. 2004 Apr;293(7-8):453-61. doi: 10.1078/1438-4221-00290.
9
Mobilization of the Salmonella genomic island SGI1 and the Proteus genomic island PGI1 by the A/C2 plasmid carrying blaTEM-24 harboured by various clinical species of Enterobacteriaceae.携带blaTEM-24的A/C2质粒对沙门氏菌基因组岛SGI1和变形杆菌基因组岛PGI1的动员作用,该质粒存在于多种临床肠杆菌科菌种中。
J Antimicrob Chemother. 2016 Aug;71(8):2167-70. doi: 10.1093/jac/dkw151. Epub 2016 May 5.
10
Horizontal transfer of Yersinia high-pathogenicity island by the conjugative RP4 attB target-presenting shuttle plasmid.通过接合型RP4 attB靶标呈递穿梭质粒实现耶尔森菌高致病性岛的水平转移。
Mol Microbiol. 2005 Aug;57(3):727-34. doi: 10.1111/j.1365-2958.2005.04722.x.

引用本文的文献

1
Insights into the dynamics and evolution of Rummeliibacillus stabekisii prophages in extreme environments: from Antarctic soil to spacecraft floors.对极端环境中斯氏鲁梅利芽孢杆菌原噬菌体的动态变化及进化的见解:从南极土壤到航天器地板
Extremophiles. 2024 Dec 21;29(1):10. doi: 10.1007/s00792-024-01377-9.
2
The ESKAPE mobilome contributes to the spread of antimicrobial resistance and CRISPR-mediated conflict between mobile genetic elements.ESKAPE 移动组学促进了抗生素耐药性的传播和移动遗传元件之间的 CRISPR 介导的冲突。
Nucleic Acids Res. 2023 Jan 11;51(1):236-252. doi: 10.1093/nar/gkac1220.
3
ggMOB: Elucidation of genomic conjugative features and associated cargo genes across bacterial genera using genus-genus mobilization networks.

本文引用的文献

1
Yersiniabactin reduces the respiratory oxidative stress response of innate immune cells.耶尔森菌素降低固有免疫细胞的呼吸氧化应激反应。
PLoS One. 2009 Dec 29;4(12):e8240. doi: 10.1371/journal.pone.0008240.
2
Isolation and characterization of rhamnolipid-producing bacterial strains from a biodiesel facility.从生物柴油工厂中分离并鉴定产鼠李糖脂的细菌菌株。
FEMS Microbiol Lett. 2009 Jun;295(1):82-7. doi: 10.1111/j.1574-6968.2009.01581.x.
3
Identification of resistance and virulence factors in an epidemic Enterobacter hormaechei outbreak strain.
ggMOB:利用属间转移网络阐明细菌属间的基因组接合特征及相关的运载基因
Front Genet. 2022 Dec 8;13:1024577. doi: 10.3389/fgene.2022.1024577. eCollection 2022.
4
Distribution of Extended-Spectrum β-Lactamase Genes and Antimicrobial Susceptibility among Residents in Geriatric Long-Term Care Facilities in Japan.日本老年长期护理机构居民中广谱β-内酰胺酶基因分布及抗菌药物敏感性
Antibiotics (Basel). 2021 Dec 29;11(1):36. doi: 10.3390/antibiotics11010036.
5
Forest and Trees: Exploring Bacterial Virulence with Genome-wide Association Studies and Machine Learning.森林与树木:利用全基因组关联研究和机器学习探索细菌毒力。
Trends Microbiol. 2021 Jul;29(7):621-633. doi: 10.1016/j.tim.2020.12.002. Epub 2021 Jan 14.
6
Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations.肠杆菌科细菌中携带耶尔森菌素的可移动元件 ICEKp 的遗传多样性、动员和传播。
Microb Genom. 2018 Sep;4(9). doi: 10.1099/mgen.0.000196. Epub 2018 Jul 9.
7
Novel large-scale chromosomal transfer in Bacteroides fragilis contributes to its pan-genome and rapid environmental adaptation.脆弱拟杆菌中新的大规模染色体转移有助于其泛基因组和快速环境适应。
Microb Genom. 2017 Nov;3(11). doi: 10.1099/mgen.0.000136.
8
Integrative and conjugative elements and their hosts: composition, distribution and organization.整合与接合元件及其宿主:组成、分布与组织
Nucleic Acids Res. 2017 Sep 6;45(15):8943-8956. doi: 10.1093/nar/gkx607.
9
Genomic analyses of Neisseria gonorrhoeae reveal an association of the gonococcal genetic island with antimicrobial resistance.淋病奈瑟菌的基因组分析揭示了淋球菌基因岛与抗菌药物耐药性之间的关联。
J Infect. 2016 Dec;73(6):578-587. doi: 10.1016/j.jinf.2016.08.010. Epub 2016 Aug 26.
10
Evolution of a Heavy Metal Homeostasis/Resistance Island Reflects Increasing Copper Stress in Enterobacteria.重金属稳态/抗性岛的进化反映了肠道细菌中不断增加的铜胁迫。
Genome Biol Evol. 2016 Feb 17;8(3):811-26. doi: 10.1093/gbe/evw031.
一株流行的霍氏肠杆菌暴发菌株中耐药性和毒力因子的鉴定
Microbiology (Reading). 2009 May;155(Pt 5):1478-1488. doi: 10.1099/mic.0.024828-0. Epub 2009 Apr 16.
4
Quantitative metabolomics reveals an epigenetic blueprint for iron acquisition in uropathogenic Escherichia coli.定量代谢组学揭示了尿路致病性大肠杆菌中铁摄取的表观遗传蓝图。
PLoS Pathog. 2009 Feb;5(2):e1000305. doi: 10.1371/journal.ppat.1000305. Epub 2009 Feb 20.
5
Drug transport mechanism of the AcrB efflux pump.AcrB外排泵的药物转运机制。
Biochim Biophys Acta. 2009 May;1794(5):782-93. doi: 10.1016/j.bbapap.2008.12.015. Epub 2009 Jan 3.
6
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths.大肠杆菌物种中有序的基因组动态变化导致了高度多样的适应性路径。
PLoS Genet. 2009 Jan;5(1):e1000344. doi: 10.1371/journal.pgen.1000344. Epub 2009 Jan 23.
7
Role of intraspecies recombination in the spread of pathogenicity islands within the Escherichia coli species.种内重组在致病性岛在大肠杆菌种内传播中的作用。
PLoS Pathog. 2009 Jan;5(1):e1000257. doi: 10.1371/journal.ppat.1000257. Epub 2009 Jan 9.
8
Genomic diversity within the Enterobacter cloacae complex.阴沟肠杆菌复合体内部的基因组多样性。
PLoS One. 2008 Aug 21;3(8):e3018. doi: 10.1371/journal.pone.0003018.
9
Serum-induced iron-acquisition systems and TonB contribute to virulence in Klebsiella pneumoniae causing primary pyogenic liver abscess.血清诱导的铁摄取系统和托蛋白B有助于肺炎克雷伯菌引起原发性化脓性肝脓肿的毒力。
J Infect Dis. 2008 Jun 15;197(12):1717-27. doi: 10.1086/588383.
10
High incidence of plant growth-stimulating bacteria associated with the rhizosphere of wheat grown on salinated soil in Uzbekistan.与乌兹别克斯坦盐碱地种植的小麦根际相关的植物生长刺激细菌的高发生率。
Environ Microbiol. 2008 Jan;10(1):1-9. doi: 10.1111/j.1462-2920.2007.01424.x.