Department of Biology, Laboratory for Ecophysiology, Biochemistry and Toxicology, University of Antwerp, Groenenborgerlaan 171, Antwerp, Belgium.
Environ Int. 2010 Apr;36(3):254-68. doi: 10.1016/j.envint.2009.12.006. Epub 2010 Feb 1.
Daphnia are an important and widely studied model species in ecological and toxicological studies throughout the world and an official (OECD) recommended test organism. Their small size, wide distribution and easy growth conditions make this organism ideal for functional genomics based studies, including metabolic profiling and transcriptomics. In this study we used an integrated systems approach in which transcriptomic, metabolomic and energetic responses of juvenile (4days old) daphnids were evaluated in response to exposure to two poly aromatic hydrocarbons (pyrene and fluoranthene) and binary mixtures thereof. In addition, these responses were linked to responses measured during chronic experiments (21days) assessing survival, growth and reproductive traits. Custom Daphnia magna microarrays were used to assess transcriptomic changes. Hierarchical cluster analysis did not result in a clear distinction between the single compounds suggesting similar molecular modes of action. Cluster analysis with both the single compounds and the binary mixture treatments resulted in a separation of treatments based on differences in toxic ratios rather than component differences. Changes in the metabolic profiles of the organisms were investigated using Nuclear Magnetic Resonance Spectroscopy and Gas and Liquid Chromatography Mass Spectrometry. These multivariate metabolomic datasets were analyzed with Principal Components Analysis and Partial Least Squares Discriminant Analysis. The major metabolite changes responsible for the differences observed indicated a disturbance in aminosugar metabolism in all cases. The study demonstrates the potential of 'omics' to provide screening tools for monitoring of the freshwater environment--in invertebrate species--which is reasonably rapid, cost-effective and has the potential to greatly increase the amount of information obtained from aquatic toxicology testing.
水蚤是一种重要且广泛研究的模式生物,在全球的生态和毒理学研究中被广泛应用,也是官方(OECD)推荐的测试生物。其体型小、分布广泛且易于生长,使其成为功能基因组学研究的理想选择,包括代谢组学和转录组学。在这项研究中,我们采用了一种综合系统的方法,评估了暴露于两种多环芳烃(芘和荧蒽)及其混合物对幼年(4 天大)水蚤的转录组、代谢组和能量响应。此外,这些响应与评估生存、生长和繁殖特征的慢性实验(21 天)期间测量的响应相关联。使用定制的水蚤 magna 微阵列评估转录组变化。层次聚类分析没有导致单一化合物之间的明显区别,这表明它们具有相似的分子作用模式。对单一化合物和二元混合物处理进行聚类分析,结果根据毒性比的差异而不是成分差异来分离处理。使用核磁共振波谱和气相色谱-质谱联用技术研究了生物体代谢谱的变化。对这些多变量代谢组数据集进行了主成分分析和偏最小二乘判别分析。负责观察到的差异的主要代谢物变化表明,在所有情况下,氨基糖代谢都受到干扰。该研究表明,“组学”有可能为监测淡水环境中的水生毒理学测试提供筛选工具,这种方法快速、具有成本效益,并且有可能大大增加从水生毒理学测试中获得的信息量。