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黄色栖热菌 JCM 7686 的质粒 pAMI2 携带 N,N-二甲基甲酰胺降解相关基因,这些基因的表达受 LuxR 家族调控因子激活。

Plasmid pAMI2 of Paracoccus aminophilus JCM 7686 carries N,N-dimethylformamide degradation-related genes whose expression is activated by a LuxR family regulator.

机构信息

University of Warsaw, Faculty of Biology, Institute of Microbiology, Department of Bacterial Genetics, Miecznikowa 1, 02-096 Warsaw, Poland.

出版信息

Appl Environ Microbiol. 2010 Mar;76(6):1861-9. doi: 10.1128/AEM.01926-09. Epub 2010 Jan 29.

Abstract

N,N-Dimethylformamide (DMF), a toxic solvent used in the chemical industry, is frequently present in industrial wastes. Plasmid pAMI2 (18.6 kb) of Paracoccus aminophilus JCM 7686 carries genetic information which is crucial for methylotrophic growth of this bacterium, using DMF as the sole source of carbon and energy. Besides a conserved backbone related to pAgK84 of Agrobacterium radiobacter K84, pAMI2 carries a three-gene cluster coding for the protein DmfR, which has sequence similarities to members of the LuxR family of transcription regulators, and two subunits (DmfA1 and DmfA2) of N,N-dimethylformamidase, an enzyme of high substrate specificity that catalyzes the first step in the degradation of DMF. Genetic analysis revealed that these genes, which are all placed in the same orientation, constitute an inducible operon whose expression is activated in the presence of DMF by the positive transcription regulator DmfR. This operon was used to construct a strain able to degrade DMF at high concentrations that might be used in the biotreatment of DMF-containing industrial wastewaters. To our knowledge, this is the first study to provide insights into the genetic organization and regulation as well as the dissemination in bacteria of genes involved in the enzymatic breakdown of DMF.

摘要

N,N-二甲基甲酰胺(DMF)是一种在化学工业中使用的有毒溶剂,经常存在于工业废水中。黄色副球菌 JCM 7686 的质粒 pAMI2(18.6 kb)携带了对该细菌利用 DMF 作为唯一碳源和能源进行甲基营养生长至关重要的遗传信息。除了与根癌农杆菌 K84 的 pAgK84 保守骨架相关的部分之外,pAMI2 还携带了一个编码 DmfR 蛋白的三基因簇,该蛋白与 LuxR 家族转录调节剂的成员具有序列相似性,以及 N,N-二甲基甲酰胺酶的两个亚基(DmfA1 和 DmfA2),该酶具有高底物特异性,可催化 DMF 降解的第一步。遗传分析表明,这些基因均按相同方向排列,构成一个可诱导操纵子,其表达在 DMF 存在下由正转录调节剂 DmfR 激活。该操纵子被用于构建能够在高浓度下降解 DMF 的菌株,该菌株可能用于含有 DMF 的工业废水的生物处理。据我们所知,这是首次研究提供了对涉及 DMF 酶促分解的基因在细菌中的遗传组织、调控和传播的深入了解。

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