Université de Lyon, INRA, CNRS, Université Lyon 1, Ecologie Microbienne (UMR 5557, USC 1193), Bat. G. Mendel, 43 Boulevard du 11 Novembre 1918, 69622 Villeurbanne, France.
Ecology. 2009 Dec;90(12):3324-32. doi: 10.1890/09-0188.1.
Predicting biodiversity effects on ecosystem functioning requires adequate evaluation of the mechanisms explaining why more diverse systems could perform better than less diverse ones. In this context, tackling functional diversity has become an important issue. Even though the aggregation of species into functional groups supposes niche differences among groups, the concept of niche has not been fully exploited in the context of the biodiversity-ecosystem functioning research. Here we report the results of microcosm experiments where we used bacteria as a model to explore whether niche differences among species provide a good estimation of community functioning. For that we used experimental communities of denitrifying bacterial species and investigated the effects of bacterial diversity on two community processes, denitrification and anaerobic CO2-production. We first measured the activities of 16 bacterial species grown individually on six different carbon sources. We then used the same set of species to assemble communities varying in both species richness and composition in microcosms containing a mixture of all six carbon sources. The performances of individual species on individual carbon sources were used to calculate, for each process measured, an a priori index called "community niche" that accounted for the performances of the species present in a given community across the entire range of the six resources. We found that species richness had a positive but small effect on both community processes whereas community niche explained a much larger proportion of the variation. According to the results of a path analysis, community niche was the main driver for the corresponding community process, but species richness affected community niche and thus had an indirect effect on denitrification and CO2 production. In addition to community niche, the presence of particular bacterial species also influenced community functioning, indicating that other effects than the capacity to use carbon sources played a, albeit minor, role in our experiment. Our study provides evidence for the importance of resource niches in shaping biodiversity-ecosystem functioning relationships of bacterial communities.
预测生物多样性对生态系统功能的影响需要充分评估解释为什么更多样化的系统可能比更少样化的系统表现更好的机制。在这种情况下,解决功能多样性已成为一个重要问题。尽管将物种聚集到功能组中意味着组间存在生态位差异,但在生物多样性-生态系统功能研究中,生态位概念尚未得到充分利用。在这里,我们报告了微宇宙实验的结果,我们使用细菌作为模型来探索物种之间的生态位差异是否可以很好地估计群落功能。为此,我们使用了反硝化细菌物种的实验群落,并研究了细菌多样性对两个群落过程(反硝化和厌氧 CO2 产生)的影响。我们首先测量了 16 种单独在六种不同碳源上生长的细菌的活性。然后,我们使用相同的物种集合在包含所有六种碳源混合物的微宇宙中组装具有不同物种丰富度和组成的群落。然后,使用每种碳源上单个物种的表现来计算每个过程的一个先验指数,称为“群落生态位”,该指数反映了给定群落中存在的物种在整个六种资源范围内的表现。我们发现,物种丰富度对两个群落过程都有正但很小的影响,而群落生态位解释了更大比例的变化。根据路径分析的结果,群落生态位是相应群落过程的主要驱动因素,但物种丰富度影响群落生态位,从而对反硝化和 CO2 产生产生间接影响。除了群落生态位外,特定细菌物种的存在也会影响群落功能,这表明在我们的实验中,除了利用碳源的能力外,其他影响因素也起了一定作用,尽管作用较小。我们的研究为资源生态位在塑造细菌群落生物多样性-生态系统功能关系中的重要性提供了证据。