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无对角线 3D/4D HN、HN-TROSY-NOESY-TROSY。

Diagonal-free 3D/4D HN,HN-TROSY-NOESY-TROSY.

机构信息

NMR platform, CiC bioGUNE, Parque Tecnologico de Bizkaia, Ed. 800, 48160 Derio, Spain.

出版信息

J Am Chem Soc. 2010 Feb 24;132(7):2138-9. doi: 10.1021/ja910523q.

Abstract

Structural biology by NMR spectroscopy relies on measuring interproton distances via NOE cross-signals in nuclear Overhauser effect spectroscopy (NOESY) spectra. In proteins, the subset of H(N)-H'(N) NOE contacts is most important for deriving initial structural models and for spectral assignment by "NOE walking". Here we present a fully optimized NMR experiment for measuring these pivotal contacts: diagonal-free 3D/4D HN,HN-TROSY-NOESY-TROSY. It combines all of the critical requirements for extracting the optimal H(N)-H'(N) distance information: the highest resolution by consistent transverse relaxation-optimized spectroscopy (TROSY) evolution, the largest spectral dispersion in two (15)N dimensions, and maximal coverage and purity through specific suppression of the intense diagonal signals that are the main source of overlap, artifacts, and bias in any NOESY spectrum. Most notably, diagonal suppression here comes without compromising the NOE cross-signal intensities. This optimized experiment appears to be ideal for a broad range of structural studies, particularly on large deuterated, partially unfolded, helical, and membrane proteins.

摘要

通过核磁共振波谱学的结构生物学依赖于通过核磁共振各向异性效应(NOESY)谱中的 NOE 交叉信号测量质子间距离。在蛋白质中,H(N)-H'(N)NOE 接触的子集对于推导初始结构模型和通过“NOE 漫步”进行光谱分配最为重要。在这里,我们提出了一种完全优化的用于测量这些关键接触的 NMR 实验:无对角线的 3D/4D HN,HN-TROSY-NOESY-TROSY。它结合了提取最佳 H(N)-H'(N)距离信息的所有关键要求:通过一致的横向弛豫优化光谱(TROSY)演化获得最高分辨率,在两个(15)N 维度上具有最大的光谱色散,以及通过特定抑制强烈的对角线信号实现最大的覆盖范围和纯度,对角线信号是任何 NOESY 谱中重叠、伪影和偏差的主要来源。最值得注意的是,这里的对角线抑制不会影响 NOE 交叉信号强度。这个优化的实验似乎非常适合广泛的结构研究,特别是在大氘代、部分展开、螺旋和膜蛋白上。

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