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来自墨西哥利什曼原虫的别构酶的别构机制采用了岩石和锁定模型。

Allosteric mechanism of pyruvate kinase from Leishmania mexicana uses a rock and lock model.

机构信息

Structural Biochemistry Group, Institute of Structural and Molecular Biology, University of Edinburgh, Michael Swann Building, King's Buildings, Mayfield Road, Edinburgh EH9 3JR, Scotland, United Kingdom.

出版信息

J Biol Chem. 2010 Apr 23;285(17):12892-8. doi: 10.1074/jbc.M109.079905. Epub 2010 Feb 1.

Abstract

Allosteric regulation provides a rate management system for enzymes involved in many cellular processes. Ligand-controlled regulation is easily recognizable, but the underlying molecular mechanisms have remained elusive. We have obtained the first complete series of allosteric structures, in all possible ligated states, for the tetrameric enzyme, pyruvate kinase, from Leishmania mexicana. The transition between inactive T-state and active R-state is accompanied by a simple symmetrical 6 degrees rigid body rocking motion of the A- and C-domain cores in each of the four subunits. However, formation of the R-state in this way is only part of the mechanism; eight essential salt bridge locks that form across the C-C interface provide tetramer rigidity with a coupled 7-fold increase in rate. The results presented here illustrate how conformational changes coupled with effector binding correlate with loss of flexibility and increase in thermal stability providing a general mechanism for allosteric control.

摘要

变构调节为涉及许多细胞过程的酶提供了一种速率管理系统。配体控制的调节是容易识别的,但潜在的分子机制仍然难以捉摸。我们已经获得了来自墨西哥利什曼原虫的四聚酶丙酮酸激酶的所有可能连接状态的第一个完整的变构结构系列。在每个亚基中,无活性 T 态和有活性 R 态之间的转变伴随着 A 和 C 结构域核心的简单对称 6 度刚性体 rocking 运动。然而,这样形成 R 态只是机制的一部分;在 C-C 界面形成的八个必需盐桥锁提供了四聚体刚性,并使速率耦合增加了 7 倍。这里呈现的结果说明了构象变化如何与效应物结合相关联,导致灵活性丧失和热稳定性增加,从而为变构控制提供了一种普遍的机制。

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