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用于单个 NMR 光谱同时大规模代谢物检测的统计指标。

Statistical indices for simultaneous large-scale metabolite detections for a single NMR spectrum.

机构信息

Metabolome Research Group, RIKEN Plant Science Center, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan.

出版信息

Anal Chem. 2010 Mar 1;82(5):1653-8. doi: 10.1021/ac9022023.

Abstract

NMR-based metabolomics has become a practical and analytical methodology for discovering novel genes, biomarkers, metabolic phenotypes, and dynamic cell behaviors in organisms. Recent developments in NMR-based metabolomics, however, have not concentrated on improvements of comprehensiveness in terms of simultaneous large-scale metabolite detections. To resolve this, we have devised and implemented a statistical index, the SpinAssign p-value, in NMR-based metabolomics for large-scale metabolite annotation and publicized this information. It enables simultaneous annotation of more than 200 candidate metabolites from the single (13)C-HSQC (heteronuclear single quantum coherence) NMR spectrum of a single sample of cell extract.

摘要

基于 NMR 的代谢组学已成为一种实用的分析方法,可用于发现生物体中的新基因、生物标志物、代谢表型和动态细胞行为。然而,基于 NMR 的代谢组学的最新发展并未集中在提高同时大规模代谢物检测的全面性方面。为了解决这个问题,我们设计并实施了一种统计指标,即基于 NMR 的代谢组学中的 SpinAssign p 值,并公布了这些信息。它可以同时注释来自单个细胞提取物的单个 (13)C-HSQC(异核单量子相干)NMR 光谱的 200 多个候选代谢物。

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