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菜豆根瘤菌共生质粒中结瘤-固氮区域的扩增与缺失

Amplification and deletion of a nod-nif region in the symbiotic plasmid of Rhizobium phaseoli.

作者信息

Romero D, Brom S, Martínez-Salazar J, Girard M L, Palacios R, Dávila G

机构信息

Departamento de Genética Molecular, Universidad Nacional Autónoma de México, Cuernavaca, Morelos.

出版信息

J Bacteriol. 1991 Apr;173(8):2435-41. doi: 10.1128/jb.173.8.2435-2441.1991.

DOI:10.1128/jb.173.8.2435-2441.1991
PMID:2013567
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC207805/
Abstract

One remarkable characteristic of the genomes of some Rhizobium species is the frequent occurrence of rearrangements. In some instances these rearrangements alter the symbiotic properties of the strains. However, no detailed molecular mechanisms have been proposed for the generation of these rearrangements. To understand the mechanisms involved in the formation of rearrangements in the genome of Rhizobium phaseoli, we have designed a system which allows the positive selection for amplification and deletion events. We have applied this system to investigate the stability of the symbiotic plasmid of R. phaseoli. High-frequency amplification events were detected which increase the copy number of a 120-kb region carrying nodulation and nitrogen fixation genes two to eight times. Deletion events that affect the same region were also found, albeit at a lower frequency. Both kinds of rearrangements are generated by recombination between reiterated nitrogenase (nifHDK) operons flanking the 120-kb region.

摘要

某些根瘤菌物种基因组的一个显著特征是重排频繁发生。在某些情况下,这些重排会改变菌株的共生特性。然而,尚未有人提出产生这些重排的详细分子机制。为了了解菜豆根瘤菌基因组重排形成所涉及的机制,我们设计了一个系统,该系统允许对扩增和缺失事件进行正向选择。我们已应用此系统来研究菜豆根瘤菌共生质粒的稳定性。检测到高频扩增事件,该事件使携带结瘤和固氮基因的120 kb区域的拷贝数增加了2至8倍。也发现了影响同一区域的缺失事件,尽管频率较低。这两种重排都是由120 kb区域两侧的重复固氮酶(nifHDK)操纵子之间的重组产生的。

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本文引用的文献

1
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Proc Natl Acad Sci U S A. 1985 Feb;82(4):1170-4. doi: 10.1073/pnas.82.4.1170.
2
Effect of Naturally Occurring nif Reiterations on Symbiotic Effectiveness in Rhizobium phaseoli.天然存在的nif重复序列对菜豆根瘤菌共生有效性的影响。
Appl Environ Microbiol. 1988 Mar;54(3):848-850. doi: 10.1128/aem.54.3.848-850.1988.
3
Mapping of a Bradyrhizobium japonicum DNA Region Carrying Genes for Symbiosis and an Asymmetric Accumulation of Reiterated Sequences.
16 株苜蓿中华根瘤菌完整复制子的研究为研究复制子内和复制子间的基因转移、转座子相关基因座和重复元件提供了线索。
Microb Genom. 2018 May;4(5). doi: 10.1099/mgen.0.000174. Epub 2018 Apr 19.
4
Genetic Plasticity and Ethylmalonyl Coenzyme A Pathway during Acetate Assimilation in Rhodospirillum rubrum S1H under Photoheterotrophic Conditions.在光照异养条件下红假单胞菌 S1H 中乙酸同化过程中的遗传可塑性和乙基丙二酰辅酶 A 途径。
Appl Environ Microbiol. 2018 Jan 17;84(3). doi: 10.1128/AEM.02038-17. Print 2018 Feb 1.
5
Rhizobium plasmids in bacteria-legume interactions.根瘤菌质粒在细菌-豆科植物相互作用中的作用。
World J Microbiol Biotechnol. 1996 Mar;12(2):119-25. doi: 10.1007/BF00364676.
6
Large deletions in the pAtC58 megaplasmid of Agrobacterium tumefaciens can confer reduced carriage cost and increased expression of virulence genes.根癌农杆菌 pAtC58 大片段缺失可降低载体成本,增加毒性基因表达。
Genome Biol Evol. 2013;5(7):1353-64. doi: 10.1093/gbe/evt095.
7
The conjugative plasmid of a bean-nodulating Sinorhizobium fredii strain is assembled from sequences of two Rhizobium plasmids and the chromosome of a Sinorhizobium strain.一株根瘤菌弗雷氏固氮菌的结合质粒是由两个根瘤菌质粒和一株根瘤菌菌株的染色体序列组装而成的。
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8
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J Bacteriol. 2009 Aug;191(15):4987-95. doi: 10.1128/JB.00111-09. Epub 2009 Jun 5.
9
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Appl Environ Microbiol. 2008 Feb;74(3):861-74. doi: 10.1128/AEM.02099-07. Epub 2007 Dec 7.
10
Phase variation and genomic architecture changes in Azospirillum.固氮螺菌中的相变与基因组结构变化
J Bacteriol. 2006 Aug;188(15):5364-73. doi: 10.1128/JB.00521-06.
一个携带共生基因和重复序列不对称积累的大豆根瘤菌 DNA 区域的图谱。
Appl Environ Microbiol. 1987 Sep;53(9):2247-52. doi: 10.1128/aem.53.9.2247-2252.1987.
4
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J Bacteriol. 1982 Aug;151(2):560-8. doi: 10.1128/jb.151.2.560-568.1982.
5
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6
Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between rRNA (rrn) cistrons.鼠伤寒沙门氏菌中的自发串联基因重复通过rRNA(rrn)顺反子之间的不等交换产生。
Proc Natl Acad Sci U S A. 1981 May;78(5):3113-7. doi: 10.1073/pnas.78.5.3113.
7
Induced plasmid-genome rearrangements in Rhizobium japonicum.日本根瘤菌中诱导的质粒-基因组重排
J Bacteriol. 1984 Jan;157(1):218-24. doi: 10.1128/jb.157.1.218-224.1984.
8
Rhizobium phaseoli symbiotic mutants with transposon Tn5 insertions.带有转座子Tn5插入的菜豆根瘤菌共生突变体。
J Bacteriol. 1984 Apr;158(1):148-55. doi: 10.1128/jb.158.1.148-155.1984.
9
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10
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J Bacteriol. 1984 Nov;160(2):785-7. doi: 10.1128/jb.160.2.785-787.1984.