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耐热黄酶晶体结构来自于温泉栖热菌 SA-01。

Crystal structure of a thermostable old yellow enzyme from Thermus scotoductus SA-01.

机构信息

Department of Microbial, Biochemical and Food Biotechnology, BioPAD Metagenomics Platform, University of the Free State, Bloemfontein 9300, South Africa.

出版信息

Biochem Biophys Res Commun. 2010 Mar 12;393(3):426-31. doi: 10.1016/j.bbrc.2010.02.011. Epub 2010 Feb 6.

DOI:10.1016/j.bbrc.2010.02.011
PMID:20138824
Abstract

Recent characterization of the chromate reductase (CrS) from the thermophile Thermus scotoductus SA-01 revealed this enzyme to be related to the Old Yellow Enzyme (OYE) family. Here, we report the structure of a thermostable OYE homolog in its holoform at 2.2A as well as its complex with p-hydroxybenzaldehyde (pHBA). The enzyme crystallized as octamers with the monomers showing a classical TIM barrel fold which upon dimerization yields the biologically active form of the protein. A sulfate ion is bound above the si-side of the non-covalently bound FMN cofactor in the oxidized solved structure but is displaced upon pHBA binding. The active-site architecture is highly conserved as with other members of this enzyme family. The pHBA in the CrS complex is positioned by hydrogen bonding to the two conserved catalytic-site histidines. The most prominent structural difference between CrS and other OYE homologs is the size of the "capping domain". Thermostabilization of the enzyme is achieved in part through increased proline content within loops and turns as well as increased intersubunit interactions through hydrogen bonding and complex salt bridge networks. CrS is able to reduce the C=C bonds of alpha,beta-unsaturated carbonyl compounds with a preference towards cyclic substrates however no activity was observed towards beta-substituted substrates. Mutational studies have confirmed the role of Tyr177 as the proposed proton donor although reduction could still occur at a reduced rate when this residue was mutated to phenylalanine.

摘要

最近对嗜热菌 Thermus scotoductus SA-01 的铬酸盐还原酶(CrS)的特性进行了研究,结果表明该酶与旧黄酶(OYE)家族有关。在这里,我们报告了一种耐热性 OYE 同源物在其全酶形式下的 2.2A 分辨率结构,以及其与对羟基苯甲醛(pHBA)的复合物结构。该酶以八聚体形式结晶,单体显示出经典的 TIM 桶折叠,二聚化后产生蛋白质的生物活性形式。在氧化的溶解结构中,一个硫酸根离子位于非共价结合的 FMN 辅因子的 si-侧上方,但在 pHBA 结合后被取代。活性位点结构与该酶家族的其他成员高度保守。pHBA 在 CrS 复合物中的位置通过氢键与两个保守的催化位点组氨酸结合。CrS 与其他 OYE 同源物之间最显著的结构差异在于“盖帽结构域”的大小。该酶的耐热性部分通过增加环和转角中的脯氨酸含量以及通过氢键和复杂盐桥网络增加亚基间相互作用来实现。CrS 能够还原α,β-不饱和羰基化合物的 C=C 键,对环状底物具有偏好性,但是对β-取代底物没有活性。突变研究证实了 Tyr177 作为提议的质子供体的作用,尽管当该残基突变为苯丙氨酸时,还原仍可能以降低的速率发生。

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