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空肠弯曲菌致病源中单域球蛋白:新颖的 D 螺旋构象,近端氢键影响配体结合,并具有过氧化物酶样的氧化还原特性。

The single-domain globin from the pathogenic bacterium Campylobacter jejuni: novel D-helix conformation, proximal hydrogen bonding that influences ligand binding, and peroxidase-like redox properties.

机构信息

Department of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom.

出版信息

J Biol Chem. 2010 Apr 23;285(17):12747-54. doi: 10.1074/jbc.M109.084509. Epub 2010 Feb 17.

Abstract

The food-borne pathogen Campylobacter jejuni possesses a single-domain globin (Cgb) whose role in detoxifying nitric oxide has been unequivocally demonstrated through genetic and molecular approaches. The x-ray structure of cyanide-bound Cgb has been solved to a resolution of 1.35 A. The overall fold is a classic three-on-three alpha-helical globin fold, similar to that of myoglobin and Vgb from Vitreoscilla stercoraria. However, the D region (defined according to the standard globin fold nomenclature) of Cgb adopts a highly ordered alpha-helical conformation unlike any previously characterized members of this globin family, and the GlnE7 residue has an unexpected role in modulating the interaction between the ligand and the TyrB10 residue. The proximal hydrogen bonding network in Cgb demonstrates that the heme cofactor is ligated by an imidazolate, a characteristic of peroxidase-like proteins. Mutation of either proximal hydrogen-bonding residue (GluH23 or TyrG5) results in the loss of the high frequency nu(Fe-His) stretching mode (251 cm(-1)), indicating that both residues are important for maintaining the anionic character of the proximal histidine ligand. Cyanide binding kinetics for these proximal mutants demonstrate for the first time that proximal hydrogen bonding in globins can modulate ligand binding kinetics at the distal site. A low redox midpoint for the ferrous/ferric couple (-134 mV versus normal hydrogen electrode at pH 7) is consistent with the peroxidase-like character of the Cgb active site. These data provide a new insight into the mechanism via which Campylobacter may survive host-derived nitrosative stress.

摘要

食源性病原体空肠弯曲菌拥有一个单域球蛋白(Cgb),通过遗传和分子方法明确证明其在解毒一氧化氮方面发挥作用。氰化物结合的 Cgb 的 X 射线结构已解析至 1.35Å 的分辨率。整体折叠是经典的三对三α-螺旋球蛋白折叠,类似于肌红蛋白和来自粘质沙雷氏菌的 Vgb。然而,Cgb 的 D 区(根据标准球蛋白折叠命名法定义)采用高度有序的α-螺旋构象,与该球蛋白家族的任何先前表征成员都不同,并且 GlnE7 残基在调节配体与 TyrB10 残基之间的相互作用方面具有意想不到的作用。Cgb 中的近端氢键网络表明,血红素辅基通过咪唑连接,这是过氧化物酶样蛋白的特征。近端氢键残基(GluH23 或 TyrG5)中的任一位点突变都会导致高频 nu(Fe-His)伸缩模式(251cm(-1))的丢失,这表明这两个残基对于维持近端组氨酸配体的阴离子特性都很重要。这些近端突变体的氰化物结合动力学首次表明,球蛋白中的近端氢键可以调节远端位点的配体结合动力学。亚铁/铁对的低氧化还原中点(在 pH 7 时相对于标准氢电极为-134mV)与 Cgb 活性位点的过氧化物酶样特征一致。这些数据为空肠弯曲菌可能耐受宿主来源的硝化应激的机制提供了新的见解。

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