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远端氢键网络在调控空肠弯曲菌截断血红蛋白 III 氧亲和力中的作用。

Role of the distal hydrogen-bonding network in regulating oxygen affinity in the truncated hemoglobin III from Campylobacter jejuni.

机构信息

Departamento de Química Inorgánica, Analítica, y Química Fisica, INQUIMAE-CONICET, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires. Ciudad Universitaria , Buenos Aires, Argentina.

出版信息

Biochemistry. 2011 May 17;50(19):3946-56. doi: 10.1021/bi101137n. Epub 2011 Apr 25.

Abstract

Oxygen affinity in heme-containing proteins is determined by a number of factors, such as the nature and conformation of the distal residues that stabilize the heme bound-oxygen via hydrogen-bonding interactions. The truncated hemoglobin III from Campylobacter jejuni (Ctb) contains three potential hydrogen-bond donors in the distal site: TyrB10, TrpG8, and HisE7. Previous studies suggested that Ctb exhibits an extremely slow oxygen dissociation rate due to an interlaced hydrogen-bonding network involving the three distal residues. Here we have studied the structural and kinetic properties of the G8(WF) mutant of Ctb and employed state-of-the-art computer simulation methods to investigate the properties of the O(2) adduct of the G8(WF) mutant, with respect to those of the wild-type protein and the previously studied E7(HL) and/or B10(YF) mutants. Our data indicate that the unique oxygen binding properties of Ctb are determined by the interplay of hydrogen-bonding interactions between the heme-bound ligand and the surrounding TyrB10, TrpG8, and HisE7 residues.

摘要

含血红素蛋白的氧亲和力取决于许多因素,例如稳定通过氢键相互作用结合在血红素上的氧的远端残基的性质和构象。空肠弯曲菌(Campylobacter jejuni)的截断血红蛋白 III(Ctb)在远端位置包含三个潜在的氢键供体:TyrB10、TrpG8 和 HisE7。先前的研究表明,由于涉及三个远端残基的交错氢键网络,Ctb 表现出极其缓慢的氧离解速率。在这里,我们研究了 Ctb 的 G8(WF)突变体的结构和动力学特性,并采用最先进的计算机模拟方法研究了 G8(WF)突变体的 O(2)加合物的性质,以及与野生型蛋白和先前研究的 E7(HL)和/或 B10(YF)突变体的性质。我们的数据表明,Ctb 的独特氧结合特性是由血红素结合配体与周围 TyrB10、TrpG8 和 HisE7 残基之间氢键相互作用的相互作用决定的。

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