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钙离子、钙调蛋白和钙调蛋白依赖性蛋白激酶 II 催化亚基相互作用的动力学模型。

A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II.

机构信息

Center for Advanced Computing Research, California Institute of Technology, Pasadena, California, USA.

出版信息

PLoS Comput Biol. 2010 Feb 12;6(2):e1000675. doi: 10.1371/journal.pcbi.1000675.

Abstract

During the acquisition of memories, influx of Ca2+ into the postsynaptic spine through the pores of activated N-methyl-D-aspartate-type glutamate receptors triggers processes that change the strength of excitatory synapses. The pattern of Ca2+influx during the first few seconds of activity is interpreted within the Ca2+-dependent signaling network such that synaptic strength is eventually either potentiated or depressed. Many of the critical signaling enzymes that control synaptic plasticity,including Ca2+/calmodulin-dependent protein kinase II (CaMKII), are regulated by calmodulin, a small protein that can bindup to 4 Ca2+ ions. As a first step toward clarifying how the Ca2+-signaling network decides between potentiation or depression, we have created a kinetic model of the interactions of Ca2+, calmodulin, and CaMKII that represents our best understanding of the dynamics of these interactions under conditions that resemble those in a postsynaptic spine. We constrained parameters of the model from data in the literature, or from our own measurements, and then predicted time courses of activation and autophosphorylation of CaMKII under a variety of conditions. Simulations showed that species of calmodulin with fewer than four bound Ca2+ play a significant role in activation of CaMKII in the physiological regime,supporting the notion that processing of Ca2+ signals in a spine involves competition among target enzymes for binding to unsaturated species of CaM in an environment in which the concentration of Ca2+ is fluctuating rapidly. Indeed, we showed that dependence of activation on the frequency of Ca2+ transients arises from the kinetics of interaction of fluctuating Ca2+with calmodulin/CaMKII complexes. We used parameter sensitivity analysis to identify which parameters will be most beneficial to measure more carefully to improve the accuracy of predictions. This model provides a quantitative base from which to build more complex dynamic models of postsynaptic signal transduction during learning.

摘要

在记忆的获取过程中,通过激活的 N-甲基-D-天冬氨酸型谷氨酸受体的孔流入突触后棘突的 Ca2+触发改变兴奋性突触强度的过程。在活动的最初几秒钟内 Ca2+流入的模式在 Ca2+依赖性信号转导网络中被解释,使得突触强度最终被增强或减弱。许多控制突触可塑性的关键信号酶,包括 Ca2+/钙调蛋白依赖性蛋白激酶 II(CaMKII),都受到钙调蛋白的调节,钙调蛋白是一种可以结合多达 4 个 Ca2+离子的小蛋白。为了阐明 Ca2+信号转导网络如何在增强或减弱之间做出决定,我们创建了一个 Ca2+、钙调蛋白和 CaMKII 相互作用的动力学模型,该模型代表了我们对这些相互作用动力学的最佳理解,这些相互作用的条件类似于突触后棘突中的条件。我们从文献中的数据或我们自己的测量值中约束模型的参数,然后根据各种条件预测 CaMKII 的激活和自磷酸化的时间过程。模拟表明,结合少于 4 个 Ca2+的钙调蛋白物种在生理状态下对 CaMKII 的激活起着重要作用,这支持了这样一种观点,即在一个快速波动的 Ca2+浓度环境中,Ca2+信号的处理涉及靶酶之间对与未饱和的 CaM 结合的竞争。事实上,我们表明,激活对 Ca2+瞬变频率的依赖性源于 Ca2+与钙调蛋白/CaMKII 复合物的动态相互作用的动力学。我们使用参数敏感性分析来确定哪些参数将最有利于更仔细地测量,以提高预测的准确性。该模型为构建更复杂的学习过程中突触后信号转导的动态模型提供了一个定量基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e7a/2820514/155fe6f10a3a/pcbi.1000675.g001.jpg

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