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广东血管圆线虫 ES 蛋白分析:潜在寄生基因的产物?

ES proteins analysis of Angiostrongylus cantonensis: products of the potential parasitism genes?

机构信息

Biology Department, School of Life Sciences, Xiamen University, Xiamen, Fujian, 361005, China.

出版信息

Parasitol Res. 2010 Apr;106(5):1027-32. doi: 10.1007/s00436-010-1751-z. Epub 2010 Feb 23.

Abstract

The expressed sequence tags (ESTs) of Angiostrongylus cantonensis were analyzed in an attempt to gain further insight into its genomic expression patterns. A total of 1,277 ESTs of A. cantonensis were randomly downloaded from NCBI databank. ESTs were analyzed and annotated using Blastx. The result showed that there were 60 ESTs had no match to any of the proteins and gene sequences in the published databases, and 695 ESTs score more than 80. According to the function, the identified 695 ESTs could be grouped into 13 categories related to metabolism, cellular development, immune evasion, host-parasite interactions, and so on. Among them, 65 (9.4%) were proteases and protease inhibitors, represented 19 potential proteases and protease inhibitors genes; 42 (6.0%) were allergens or antigens, represented 15 potential antigens/allergens genes. Signal P analysis was applied to the 19 putative proteases and protease inhibitors and the 15 antigens/allergens protein sequences to identify the potential signal peptides and anchors. The result demonstrated that there were ten putative proteins had N-terminal signal peptides and three had signal anchors, these putative excretory/secretory proteins might be the products of potential parasitism genes which played an important role in the adaptation of A. cantonensis to a parasitism life. These parasitism genes and proteins identified are expected to become potential targets for future research on anti-A. cantonensis drugs; moreover, the resulting genetic information is useful in elucidating the mechanisms of parasitism of A. cantonensis.

摘要

从表达序列标签(ESTs)分析中了解广东住血线虫的基因表达模式。从 NCBI 数据库中随机下载了 1277 个广东住血线虫 ESTs,用 Blastx 进行分析和注释。结果显示,有 60 个 EST 与发表的数据库中的任何蛋白质和基因序列都没有匹配,有 695 个 EST 得分超过 80。根据功能,鉴定出的 695 个 ESTs 可以分为 13 类,与代谢、细胞发育、免疫逃避、宿主-寄生虫相互作用等有关。其中,65 个(9.4%)是蛋白酶和蛋白酶抑制剂,代表 19 个潜在的蛋白酶和蛋白酶抑制剂基因;42 个(6.0%)是过敏原或抗原,代表 15 个潜在的抗原/过敏原基因。对 19 个潜在的蛋白酶和蛋白酶抑制剂以及 15 个抗原/过敏原蛋白序列进行信号肽分析,以鉴定潜在的信号肽和锚定。结果表明,有 10 个潜在蛋白具有 N 端信号肽,有 3 个具有信号锚,这些潜在的分泌/分泌蛋白可能是潜在寄生基因的产物,在广东住血线虫适应寄生生活中起重要作用。这些鉴定的寄生基因和蛋白有望成为未来抗广东住血线虫药物研究的潜在靶点;此外,所得的遗传信息有助于阐明广东住血线虫的寄生机制。

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