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大肠杆菌中脂肪酸生物合成的定量分析与工程改造。

Quantitative analysis and engineering of fatty acid biosynthesis in E. coli.

机构信息

Department of Chemistry, Stanford University, Stanford, CA 94305-5025, USA.

出版信息

Metab Eng. 2010 Jul;12(4):378-86. doi: 10.1016/j.ymben.2010.02.003. Epub 2010 Feb 23.

DOI:10.1016/j.ymben.2010.02.003
PMID:20184964
Abstract

Fatty acids are central hydrocarbon intermediates in the biosynthesis of diesel from renewable sources. We have engineered an Escherichia coli cell line that produces 4.5 g/L/day total fatty acid in a fed-batch fermentation. However, further enhancement of fatty acid biosynthesis in this cell line proved unpredictable. To develop a more reliable engineering strategy, a cell-free system was developed that enabled direct, quantitative investigation of fatty acid biosynthesis and its regulation in E. coli. Using this system, the strong dependence of fatty acid synthesis on malonyl-CoA availability and several important phenomena in fatty acid synthesis were verified. Results from this cell-free system were confirmed via the generation and analysis of metabolically engineered strains of E. coli. Our quantitative findings highlight the enormous catalytic potential of the E. coli fatty acid biosynthetic pathway, and target specific steps for protein and metabolic engineering to enhance the catalytic conversion of glucose into biodiesel.

摘要

脂肪酸是从可再生资源中生产柴油的生物合成中的重要碳氢化合物中间体。我们已经构建了一种大肠杆菌细胞系,可在分批补料发酵中每天生产 4.5 克/升的总脂肪酸。然而,进一步提高该细胞系中的脂肪酸生物合成证明是不可预测的。为了开发更可靠的工程策略,开发了一种无细胞系统,该系统可直接定量研究大肠杆菌中脂肪酸的生物合成及其调节。使用该系统,验证了脂肪酸合成对丙二酰辅酶 A 可用性的强烈依赖性以及脂肪酸合成中的几个重要现象。通过生成和分析大肠杆菌的代谢工程菌株,对无细胞系统的结果进行了验证。我们的定量发现突出了大肠杆菌脂肪酸生物合成途径的巨大催化潜力,并针对特定步骤进行蛋白质和代谢工程,以提高葡萄糖转化为生物柴油的催化转化率。

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1
Quantitative analysis and engineering of fatty acid biosynthesis in E. coli.大肠杆菌中脂肪酸生物合成的定量分析与工程改造。
Metab Eng. 2010 Jul;12(4):378-86. doi: 10.1016/j.ymben.2010.02.003. Epub 2010 Feb 23.
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Metabolic engineering for efficient supply of acetyl-CoA from different carbon sources in Escherichia coli.大肠杆菌中从不同碳源高效供应乙酰辅酶 A 的代谢工程。
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Improving fatty acids production by engineering dynamic pathway regulation and metabolic control.通过工程化动态途径调控和代谢控制来提高脂肪酸的产量。
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Improving fatty acid production in Escherichia coli through the overexpression of malonyl coA-acyl carrier protein transacylase.通过过表达丙二酰辅酶 A-酰基载体蛋白转酰基酶提高大肠杆菌中的脂肪酸产量。
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Harnessing biodiesel-producing microbes: from genetic engineering of lipase to metabolic engineering of fatty acid biosynthetic pathway.利用产生物柴油的微生物:从脂肪酶的基因工程到脂肪酸生物合成途径的代谢工程。
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引用本文的文献

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Int J Mol Sci. 2023 Apr 6;24(7):6864. doi: 10.3390/ijms24076864.
2
Engineering a Novel Metabolic Pathway for Improving Cellular Malonyl-CoA Levels in Escherichia coli.工程改造新型代谢途径提高大肠杆菌细胞丙二酰辅酶 A 水平。
Mol Biotechnol. 2023 Sep;65(9):1508-1517. doi: 10.1007/s12033-022-00635-5. Epub 2023 Jan 19.
3
Fatty Acid Production by Enhanced Malonyl-CoA Supply in Escherichia coli.
增强丙二酰辅酶 A 供应在大肠杆菌中脂肪酸的生产。
Curr Microbiol. 2022 Jul 26;79(9):269. doi: 10.1007/s00284-022-02969-4.
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Biosynthetic Pathway and Metabolic Engineering of Succinic Acid.琥珀酸的生物合成途径与代谢工程
Front Bioeng Biotechnol. 2022 Mar 8;10:843887. doi: 10.3389/fbioe.2022.843887. eCollection 2022.
5
Kinetically guided, ratiometric tuning of fatty acid biosynthesis.动力学控制的脂肪酸生物合成的比例调节。
Metab Eng. 2022 Jan;69:209-220. doi: 10.1016/j.ymben.2021.11.008. Epub 2021 Nov 23.
6
Genome-scale target identification in Escherichia coli for high-titer production of free fatty acids.大肠杆菌中游离脂肪酸高产的全基因组靶点鉴定。
Nat Commun. 2021 Aug 17;12(1):4976. doi: 10.1038/s41467-021-25243-w.
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Elucidation of transient protein-protein interactions within carrier protein-dependent biosynthesis.阐明载体蛋白依赖性生物合成过程中的瞬时蛋白质-蛋白质相互作用。
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