The Key Laboratory of Protein Chemistry and Developmental Biology of Ministry of Education, College of Life Sciences, Hunan Normal University, Changsha 410081, China.
J Proteome Res. 2010 May 7;9(5):2550-64. doi: 10.1021/pr1000016.
The tarantula Haplopelma hainanum (Ornithoctonus hainana) is a very venomous spider found widely in the hilly areas of Hainan province in southern China. Its venom contains a variety of toxic components with different pharmacological properties. In the present study, we used a venomic strategy for high-throughput identification of tarantula-venom peptides from H. hainanum. This strategy includes three different approaches: (i) transcriptomics, that is, EST-based cloning and PCR-based cloning plus DNA sequencing; (ii) peptidomics, that is, off-line multiple dimensional liquid chromatography coupled with mass spectrometry (MDLC-MS) plus peptide sequencing (direct Edman sequencing and bottom-up mass spectrometric sequencing); (iii) genomics, that is, genomic DNA cloning plus DNA sequencing. About 420 peptide toxins were detected by mass spectrometry, and 272 peptide precursors were deduced from cDNA and genomic DNA sequences. After redundancy removal, 192 mature sequences were identified by three approaches. This is the largest number of peptide toxin sequences identified from a spider species so far. On the basis of precursor sequence identity, peptide toxins from the tarantula H. hainanum venom can be classified into 11 superfamilies (and related families). Our results revealed that gene duplication and focal hypermutation may be responsible for the enormous molecular diversity in spider peptide toxins. The current work is an initial overview for the study of tarantula-venom peptides in parallel transcriptomic, peptidomic, and genomic analyses. It is hoped that this work will also provide an effective guide for high-throughput identification of peptide toxins from other spider species, especially tarantula species.
海南捕鸟蛛(Ornithoctonus hainana)是一种毒性很强的蜘蛛,广泛分布于中国南部海南省的丘陵地区。其毒液含有多种具有不同药理学特性的毒性成分。在本研究中,我们采用了一种基于毒液组学的策略,用于从海南捕鸟蛛中高通量鉴定蜘蛛毒液肽。该策略包括三种不同的方法:(i)转录组学,即基于 EST 的克隆和基于 PCR 的克隆加 DNA 测序;(ii)肽组学,即离线多维液相色谱与质谱联用(MDLC-MS)加肽测序(直接 Edman 测序和自上而下的质谱测序);(iii)基因组学,即基因组 DNA 克隆加 DNA 测序。通过质谱检测到约 420 种肽毒素,从 cDNA 和基因组 DNA 序列中推断出 272 种肽前体。去除冗余后,通过三种方法鉴定出 192 个成熟序列。这是迄今为止从蜘蛛物种中鉴定出的肽毒素序列数量最多的一次。根据前体序列的同一性,海南捕鸟蛛毒液中的肽毒素可分为 11 个超家族(和相关家族)。我们的研究结果表明,基因复制和焦点超突变可能是蜘蛛肽毒素巨大分子多样性的原因。目前的工作是在平行转录组学、肽组学和基因组学分析中研究蜘蛛毒液肽的初步概述。希望这项工作也能为从其他蜘蛛物种,特别是捕鸟蛛物种中高通量鉴定肽毒素提供有效的指导。