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基于转录组学与蛋白质组学分析的胡氏长足蛛毒液组学研究。

Venomics of the spider Ornithoctonus huwena based on transcriptomic versus proteomic analysis.

机构信息

Hunan Normal University, Changsha, Hunan, China.

出版信息

Comp Biochem Physiol Part D Genomics Proteomics. 2010 Jun;5(2):81-8. doi: 10.1016/j.cbd.2010.01.001. Epub 2010 Jan 28.

Abstract

The spider Ornithoctonus huwena is a venomous spider found in southern China. Its venom is a complex mixture of numerous biologically active components. In this study, 41 novel unique transcripts encoding cellular proteins or other possible venom components were generated from the previously constructed cDNA library. These proteins were also annotated by KOG (eukaryotic orthologous group) and GO (gene ontology) terms. A novel cellular transcript contig encoding an EF-hand protein (named HWEFHP1) was found, which might be involved in the secretion of toxins in the venom glands. In order to have an overview of the molecular diversity of the O. huwena venom, the datasets of all the transcripts, peptides and proteins known so far were analyzed. A comparison of the data obtained through a proteomic versus a transcriptomic approach, revealed that only 15 putative cystine knot toxins (CKTs) were identified by both approaches, 29 transcripts coding for CKTs were found in the transcriptome but not as translated peptides in the venom proteome. However, no cellular protein with identical molecular weight was identified by both approaches. Our data may contribute to a deeper understanding of the biology and ecology of O. huwena and the relationship between structure and function of individual toxins.

摘要

虎纹捕鸟蛛是一种在中国南方发现的有毒蜘蛛。它的毒液是由许多具有生物活性的成分组成的复杂混合物。在这项研究中,从之前构建的 cDNA 文库中产生了 41 个新的独特转录本,编码细胞蛋白或其他可能的毒液成分。这些蛋白质还通过 KOG(真核同源群)和 GO(基因本体论)术语进行了注释。发现了一个新的细胞转录本,编码一个 EF 手蛋白(命名为 HWEFHP1),它可能参与毒液腺中毒素的分泌。为了全面了解虎纹捕鸟蛛毒液的分子多样性,对迄今为止已知的所有转录本、肽和蛋白质数据集进行了分析。通过蛋白质组学和转录组学方法获得的数据的比较表明,只有 15 种假定的半胱氨酸结毒素(CKTs)通过这两种方法被鉴定出来,在转录组中发现了 29 种编码 CKTs 的转录本,但在毒液蛋白质组中没有作为翻译肽被发现。然而,两种方法都没有鉴定出分子量相同的细胞蛋白。我们的数据可能有助于更深入地了解虎纹捕鸟蛛的生物学和生态学以及单个毒素的结构与功能之间的关系。

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