Centers for Disease Control and Prevention, National Center for Infectious Diseases, Division of Healthcare Quality Promotion, Atlanta, GA 30333, United States.
J Microbiol Methods. 2010 May;81(2):141-6. doi: 10.1016/j.mimet.2010.02.010. Epub 2010 Mar 1.
Twelve Laboratory Response Network (LRN) affiliated laboratories participated in a validation study of a macrofoam swab protocol for the recovery, detection, and quantification of viable B. anthracis (BA) Sterne spores from steel surfaces. CDC personnel inoculated steel coupons (26cm(2)) with 1-4 log(10) BA spores and recovered them by sampling with pre-moistened macrofoam swabs. Phase 1 (P1) of the study evaluated swabs containing BA only, while dust and background organisms were added to swabs in Phase 2 (P2) to mimic environmental conditions. Laboratories processed swabs and enumerated spores by culturing eluted swab suspensions and counting colonies with morphology consistent with BA. Processed swabs were placed in enrichment broth, incubated 24h, and cultured by streaking for isolation. Real-time PCR was performed on selected colonies from P2 samples to confirm the identity of BA. Mean percent recovery (%R) of spores from the surface ranged from 15.8 to 31.0% (P1) and from 27.9 to 55.0% (P2). The highest mean percent recovery was 31.0% (sd 10.9%) for P1 (4 log(10) inoculum) and 55.0% (sd 27.6%) for P2 (1 log(10) inoculum). The overall %R was higher for P2 (44.6%) than P1 (24.1%), but the overall reproducibility (between-lab variability) was lower in P2 than in P1 (25.0 vs 16.5%CV, respectively). The overall precision (within-lab variability) was close to identical for P1 and P2 (44.0 and 44.1, respectively), but varied greatly between inoculum levels. The protocol demonstrated linearity in %R over the three inoculum levels and is able to detect between 26 and 5x10(6)spores/26cm(2). Sensitivity as determined by culture was >98.3% for both phases and all inocula, suggesting that the culture method maintains sensitivity in the presence of contaminants. The enrichment broth method alone was less sensitive for sampled swabs (66.4%) during P2, suggesting that the presence of background organisms inhibited growth or isolation of BA from the broth. The addition of real-time PCR testing to the assay increased specificity from >85.4% to >95.0% in P2. Although the precision was low at the 1 log(10) inoculum level in both phases (59.0 and 50.2%), this swab processing protocol, was sensitive, specific, precise, and reproducible at 2-4 log(10)/26cm(2) spore concentrations.
十二家实验室反应网络(LRN)附属实验室参与了一项宏观泡沫拭子方案的验证研究,该方案用于从钢表面回收、检测和定量存活炭疽杆菌(BA)斯特恩孢子。CDC 人员用 1-4 个对数 10 BA 孢子接种钢优惠券(26cm(2)),并用预湿润的宏观泡沫拭子回收。研究的第一阶段(P1)评估了仅含 BA 的拭子,而在第二阶段(P2)将灰尘和背景生物添加到拭子中以模拟环境条件。实验室通过培养洗脱拭子悬液并计数与 BA 形态一致的菌落来处理拭子并对孢子进行计数。处理过的拭子放入增菌肉汤中,孵育 24 小时,然后划线培养以分离。对 P2 样本中的选定菌落进行实时 PCR 以确认 BA 的身份。从表面回收的孢子的平均回收率(%R)范围为 15.8-31.0%(P1)和 27.9-55.0%(P2)。最高平均回收率为 31.0%(标准差 10.9%),用于 P1(4 个对数 10 接种物)和 55.0%(标准差 27.6%),用于 P2(1 个对数 10 接种物)。总体而言,P2(44.6%)的回收率高于 P1(24.1%),但 P2 的总体重现性(实验室间变异性)低于 P1(分别为 25.0%和 16.5%CV)。P1 和 P2 的总体精密度(实验室内变异性)接近相同(分别为 44.0 和 44.1),但在接种物水平之间差异很大。该方案显示出在三个接种物水平上的 %R 呈线性,并且能够检测到 26 至 5x10(6)个孢子/26cm(2)之间的孢子。在两个阶段和所有接种物中,通过培养法测定的灵敏度均>98.3%,表明该培养方法在存在污染物的情况下保持了灵敏度。在 P2 期间,单独使用增菌肉汤法对采样拭子的灵敏度较低(66.4%),这表明背景生物的存在抑制了 BA 从肉汤中的生长或分离。在 P2 中,将实时 PCR 测试添加到检测中可将特异性从>85.4%提高到>95.0%。尽管在两个阶段的 1 个对数 10 接种物水平(59.0%和 50.2%)的精密度较低,但该拭子处理方案在 2-4 个对数 10/26cm(2)孢子浓度下具有敏感性、特异性、精密度和重现性。