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QM/MM MD 模拟碘离子(I(-))在水溶液中的行为:离子-水和水-水氢键相互作用之间的微妙平衡。

QM/MM MD simulations of iodide ion (I(-)) in aqueous solution: a delicate balance between ion-water and water-water H-bond interactions.

机构信息

School of Chemistry, Institute of Science, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand.

出版信息

J Phys Chem A. 2010 Apr 1;114(12):4334-9. doi: 10.1021/jp910435d.

Abstract

The characteristics of an iodide ion (I(-)) in aqueous solution were investigated by means of HF/MM and B3LYP/MM molecular dynamics simulations, in which the ion and its surrounding water molecules were treated at HF and B3LYP levels using the LANL2DZdp and D95 V+ basis sets for I(-) and water, respectively. According to both the HF/MM and B3LYP/MM results, the ion-water interactions are relatively weak, compared to the water-water hydrogen bonds, thus causing an unstructured nature of the hydration shell. Comparing the HF and B3LYP treatments for the description of this hydrated ion, the overestimation of the ion-water hydrogen-bond strength by the B3LYP method is recognizable, yielding a remarkably more compact and too rigid ion-water complex.

摘要

采用 HF/MM 和 B3LYP/MM 分子动力学模拟研究了碘离子(I(-))在水溶液中的特性,其中采用 LANL2DZdp 和 D95 V+基组分别在 HF 和 B3LYP 水平上处理了离子及其周围的水分子。根据 HF/MM 和 B3LYP/MM 的结果,与水分子间的氢键相比,离子与水分子之间的相互作用较弱,从而导致水合壳的非结构化性质。比较 HF 和 B3LYP 处理方法对水合离子的描述,B3LYP 方法高估了离子与水分子之间氢键的强度,导致形成了一个显著更紧凑且过于刚性的离子-水分子复合物。

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