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Characterization of a K+-induced conformational switch in a human telomeric DNA oligonucleotide using 2-aminopurine fluorescence.利用 2-氨基嘌呤荧光法研究人类端粒 DNA 寡核苷酸中 K+诱导的构象开关的特性。
Biochemistry. 2010 Jan 12;49(1):179-94. doi: 10.1021/bi901357r.
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Thermodynamic aspects of coupled binding and folding of an intrinsically disordered protein: a computational alanine scanning study.内在无序蛋白质的耦合结合与折叠的热力学方面:一项计算丙氨酸扫描研究。
Biochemistry. 2009 Dec 8;48(48):11332-4. doi: 10.1021/bi901705z.
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Energetic coupling between clustered lesions modulated by intervening triplet repeat bulge loops: allosteric implications for DNA repair and triplet repeat expansion.簇集病变之间的能量偶联受间隔三重复突环的调节:对 DNA 修复和三重复扩展的变构影响。
Biopolymers. 2010 Apr;93(4):355-69. doi: 10.1002/bip.21343.
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The origin of allosteric functional modulation: multiple pre-existing pathways.变构功能调节的起源:多条预先存在的途径。
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DNA repair and DNA triplet repeat expansion: the impact of abasic lesions on triplet repeat DNA energetics.DNA修复与DNA三联体重复序列扩增:无碱基损伤对三联体重复DNA能量学的影响。
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Non-B DNA conformations as determinants of mutagenesis and human disease.非B型DNA构象作为诱变和人类疾病的决定因素
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Protein allostery, signal transmission and dynamics: a classification scheme of allosteric mechanisms.蛋白质变构、信号转导与动力学:变构机制的分类方案
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The yield, processing, and biological consequences of clustered DNA damage induced by ionizing radiation.电离辐射诱导的簇状DNA损伤的产生、处理及生物学后果。
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DNA 损伤之间的能量串扰:对 DNA 修复和三核苷酸重复扩展途径的变构偶联的影响。

Energy crosstalk between DNA lesions: implications for allosteric coupling of DNA repair and triplet repeat expansion pathways.

机构信息

Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, New Jersey 08854, USA.

出版信息

J Am Chem Soc. 2010 Mar 31;132(12):4095-7. doi: 10.1021/ja1002857.

DOI:10.1021/ja1002857
PMID:20218680
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3908660/
Abstract

Energy coupling between distal DNA domains may have profound regulatory consequences for biological processes, allowing for allosteric control of nucleic acid function. Repair of oxidative lesions at or near triplet repeat domains can enhance DNA expansion events that result in debilitating disease states. We report here position, distance, and lesion-dependent energy crosstalk between pairs of lesions in a triplet repeat bulge loop and an adjacent duplex domain. We discuss the implications of such coupled communication between lesions in distal loop and duplex domains for lesion repair and DNA expansion associated with diseases.

摘要

远端 DNA 结构域之间的能量耦合可能对生物过程具有深远的调控作用,从而实现对核酸功能的变构控制。在三核苷酸重复结构域或其附近发生的氧化损伤的修复,可能会增强导致疾病状态的 DNA 扩展事件。我们在此报告在三核苷酸重复膨出环和相邻双链结构域中的一对损伤之间,依赖于位置、距离和损伤的能量串扰。我们讨论了这种在远端环和双链结构域中的损伤之间的偶联通讯对与疾病相关的损伤修复和 DNA 扩展的影响。