Faculty of Veterinary Medicine, Department of Production Animal Medicine, University of Helsinki, Finland.
Acta Vet Scand. 2010 Mar 10;52(1):21. doi: 10.1186/1751-0147-52-21.
Animal mycobacterioses are regarded as a potential zoonotic risk and cause economical losses world wide. M. avium subsp. hominissuis is a slow-growing subspecies found in mycobacterial infected humans and pigs and therefore rapid and discriminatory typing methods are needed for epidemiological studies. The genetic similarity of M. avium subsp. hominissuis from human and porcine origins using two different typing methods have not been studied earlier. The objective of this study was to compare the IS1245 RFLP pattern and MIRU-VNTR typing to study the genetic relatedness of M. avium strains isolated from slaughter pigs and humans in Finland with regard to public health aspects.
A novel PCR-based genotyping method, variable number tandem repeat (VNTR) typing of eight mycobacterial interspersed repetitive units (MIRUs), was evaluated for its ability to characterize Finnish Mycobacterium avium subsp. hominissuis strains isolated from pigs (n = 16) and humans (n = 13) and the results were compared with those obtained by the conventional IS1245 RFLP method.
The MIRU-VNTR results showed a discriminatory index (DI) of 0,92 and the IS1245 RFLP resulted in DI 0,98. The combined DI for both methods was 0,98. The MIRU-VNTR test has the advantages of being simple, reproducible, non-subjective, which makes it suitable for large-scale screening of M. avium strains.
Both typing methods demonstrated a high degree of similarity between the strains of human and porcine origin. The parallel application of the methods adds epidemiological value to the comparison of the strains and their origins. The present approach and results support the hypothesis that there is a common source of M. avium subsp. hominissuis infection for pigs and humans or alternatively one species may be the infective source to the other.
动物分枝杆菌病被认为是一种潜在的人畜共患病风险,在全球范围内造成经济损失。禽分枝杆菌亚种。同源是人感染分枝杆菌和猪分枝杆菌中发现的一种生长缓慢的亚种,因此需要快速和有区别的分型方法进行流行病学研究。以前没有研究过人源和猪源禽分枝杆菌亚种。同源使用两种不同的分型方法的遗传相似性。本研究的目的是比较 IS1245 RFLP 图谱和 MIRU-VNTR 分型,研究来自芬兰屠宰猪和人类的禽分枝杆菌分离株的遗传相关性,从公共卫生角度考虑。
一种新的基于 PCR 的基因分型方法,即 8 个分枝杆菌插入序列重复单位(MIRU)的可变数串联重复(VNTR)分型,用于评估其对来自猪(n = 16)和人类(n = 13)的芬兰禽分枝杆菌亚种。同源分枝杆菌分离株的特征,并将结果与传统的 IS1245 RFLP 方法进行比较。
MIRU-VNTR 结果显示区分指数(DI)为 0.92,IS1245 RFLP 结果为 DI 0.98。两种方法的组合 DI 为 0.98。MIRU-VNTR 试验具有简单、可重复、非主观的优点,适合大规模筛选禽分枝杆菌菌株。
两种分型方法均显示人源和猪源菌株之间具有高度相似性。两种方法的平行应用为比较菌株及其来源增加了流行病学价值。目前的方法和结果支持这样一种假设,即猪和人类的禽分枝杆菌亚种。同源感染有共同的来源,或者另一种可能是另一种的感染源。