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酶数据库。

Enzyme databases.

作者信息

Schomburg Dietmar, Schomburg Ida

机构信息

Department of Bioinformatics and Biochemistry, Technische Universität Carolo-Wilhelmina zu Braunschweig, Braunschweig, Germany.

出版信息

Methods Mol Biol. 2010;609:113-28. doi: 10.1007/978-1-60327-241-4_7.

Abstract

Enzymes are catalysts for the chemical reactions in the metabolism of all organisms and play a key role in the regulation of metabolic steps within the cells, as drug targets, and in a wide range of biotechnological applications. With respect to reaction type, they are grouped into six classes, namely oxidoreductases, transferases, hydrolases, lyases, and ligases. EC-Numbers are assigned by the IUBMB. Enzyme functional databases cover a wide range of properties and functions, such as occurrence, kinetics of enzyme-catalyzed reactions, structure, or metabolic function. BRENDA stores a large variety of different data for all classified enzymes whereas KEGG, MEROPS, MetaCyc, REBASE, CAzy, ESTHER, PeroxiBase, and KinBase specialize in either certain aspects of enzyme function or specific enzyme classes, organisms, or metabolic pathways. Databases covering enzyme nomenclature are ExplorEnz, SIB-ENZYME, and IntEnz.

摘要

酶是所有生物体新陈代谢中化学反应的催化剂,在细胞内代谢步骤的调节、作为药物靶点以及广泛的生物技术应用中发挥着关键作用。就反应类型而言,它们被分为六大类,即氧化还原酶、转移酶、水解酶、裂合酶和连接酶。酶委员会编号由国际生物化学与分子生物学联盟(IUBMB)指定。酶功能数据库涵盖了广泛的特性和功能,如存在情况、酶催化反应的动力学、结构或代谢功能。BRENDA为所有分类酶存储了大量不同的数据,而KEGG、MEROPS、MetaCyc、REBASE、CAzy、ESTHER、PeroxiBase和KinBase则专注于酶功能的某些方面或特定的酶类、生物体或代谢途径。涵盖酶命名法的数据库有ExplorEnz、SIB - ENZYME和IntEnz。

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