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建立环介导等温扩增检测方法用于快速检测 J 亚群禽白血病病毒

Development of a loop-mediated isothermal amplification assay for rapid detection of subgroup J avian leukosis virus.

机构信息

Key Laboratory of Animal Disease Control and Prevention of the Ministry of Agriculture, College of Veterinary Medicine, South China Agricultural University, 483 Wushan Road, Tianhe District, Guangzhou 510642, People's Republic of China.

出版信息

J Clin Microbiol. 2010 Jun;48(6):2116-21. doi: 10.1128/JCM.02530-09. Epub 2010 Apr 7.

Abstract

Infection of breeder flocks in China with subgroup J avian leukosis virus (ALV-J) has increased recently. In this study, we have developed a loop-mediated isothermal amplification (LAMP) assay for rapid detection of ALV-J from culture isolates and clinical samples. The ALV-J-specific LAMP assay efficiently amplified the target gene within 45 min at 63 degrees C using only a simple laboratory water bath. To determine the specificity of the LAMP assay, various subgroup ALVs and other related viruses were detected. A ladder pattern on gel electrophoresis was observed for ALV-J isolates but not for other viruses. To evaluate the sensitivities of the LAMP assay and conventional PCR, the NX0101 isolate plasmid DNA was amplified by them. The detection limit of the LAMP assay was 5 target gene copies/reaction, which was up to 20 times higher than that of conventional PCR. To evaluate the application of the LAMP assay for detection of ALV-J in clinical samples, 49 samples suspected of ALV infection from breeder flocks were tested by the LAMP assay and PCR. Moreover, virus isolation from these samples was also performed using cell culture. The positive-sample ratios were 21/49 (43%) by conventional PCR, 26/49 (53%) by the LAMP assay, and 19/46 (41%) by virus isolation. Additionally, a positive LAMP reaction can be visually ascertained by the observation of turbidity or a color change after addition of SYBR green I dye. Consequently, the LAMP assay is a simple, rapid, and sensitive diagnostic method and can potentially be developed for rapid detection of ALV-J infection in the field.

摘要

在中国,种鸡群中感染 J 亚群禽白血病病毒(ALV-J)的情况最近有所增加。在这项研究中,我们开发了一种环介导等温扩增(LAMP)检测方法,用于快速检测来自培养物和临床样本的 ALV-J。该 ALV-J 特异性 LAMP 检测法在 63°C 下仅使用简单的实验室水浴,45 分钟内即可有效地扩增靶基因。为了确定 LAMP 检测法的特异性,检测了各种亚群 ALV 和其他相关病毒。凝胶电泳上观察到 ALV-J 分离株的梯状图案,但其他病毒则没有。为了评估 LAMP 检测法和常规 PCR 的敏感性,用它们扩增了 NX0101 分离株质粒 DNA。LAMP 检测法的检测限为 5 个靶基因拷贝/反应,比常规 PCR 高 20 倍。为了评估 LAMP 检测法在临床样本中检测 ALV-J 的应用,用 LAMP 检测法和 PCR 检测了来自种鸡群的 49 份疑似 ALV 感染的样本。此外,还使用细胞培养从这些样本中分离病毒。常规 PCR 的阳性样本比例为 49/49(100%),LAMP 检测法为 49/49(100%),病毒分离法为 46/49(94%)。此外,通过添加 SYBR 绿 I 染料后浊度或颜色变化可目视确认阳性 LAMP 反应。因此,LAMP 检测法是一种简单、快速、敏感的诊断方法,可用于现场快速检测 ALV-J 感染。

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