Pérez-Dorado Inmaculada, Sanles Reyes, González Ana, García Pedro, García José L, Martínez-Ripoll Martín, Hermoso Juan A
Grupo de Cristalografía Macromolecular y Biología Estructural, Instituto de Química-Física Rocasolano, CSIC, Serrano 119, 28006 Madrid, Spain.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Apr 1;66(Pt 4):448-51. doi: 10.1107/S1744309110006081. Epub 2010 Mar 31.
LytC, one of the major autolysins from the human pathogen Streptococcus pneumoniae, has been crystallized as needles by the hanging-drop technique using 10%(w/v) PEG 3350 as precipitant and 10 mM HEPES pH 7.5. LytC crystals were quickly soaked in mother liquor containing 2 mM of the complex Gd-HPDO3A to produce derivatized crystals (LytC(Gd-HPDO3A)). Both native LytC and isomorphous LytC(Gd-HPDO3A) crystals were flash-cooled in a nitrogen flow at 120 K prior to X-ray data collection using an in-house Enraf-Nonius rotating-anode generator (lambda = 1.5418 A) and a MAR345 imaging-plate detector. In both cases, good-quality diffraction patterns were obtained at high resolution. LytC(Gd-HPDO3A) crystals allowed the collection of a SAD X-ray data set to 2.6 A resolution indexed in terms of a P2(1) monoclinic unit cell with parameters a = 59.37, b = 67.16, c = 78.85 A, beta = 105.69 degrees . The anomalous Patterson map allowed the identification of one heavy-atom binding site, which was sufficient for the calculation of an interpretable anomalous map at 2.6 A resolution.
LytC是人类病原体肺炎链球菌的主要自溶素之一,通过悬滴法,以10%(w/v)的聚乙二醇3350作为沉淀剂、10 mM pH 7.5的HEPES作为缓冲液,将其结晶为针状晶体。将LytC晶体迅速浸泡在含有2 mM钆-1,4,7,10-四氮杂环十二烷-N,N',N'',N'''-四乙酸(Gd-HPDO3A)复合物的母液中,以生成衍生化晶体(LytC(Gd-HPDO3A))。在使用内部的恩拉夫-诺尼乌斯旋转阳极发生器(波长λ = 1.5418 Å)和MAR345成像板探测器进行X射线数据收集之前,将天然LytC晶体和同晶型的LytC(Gd-HPDO3A)晶体在120 K的氮气流中快速冷冻。在这两种情况下,均获得了高分辨率的高质量衍射图谱。LytC(Gd-HPDO3A)晶体使得能够收集到分辨率为2.6 Å的单波长反常散射(SAD)X射线数据集,该数据集以P2(1)单斜晶胞为索引,其参数为a = 59.37、b = 67.16、c = 78.85 Å,β = 105.69°。反常帕特森图使得能够识别出一个重原子结合位点,该位点足以用于计算分辨率为2.6 Å的可解释反常图谱。