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利用镧系配合物对大分子组装体进行相分离。

Using lanthanoid complexes to phase large macromolecular assemblies.

机构信息

CEA, IBS, F-38054 Grenoble, France.

出版信息

J Synchrotron Radiat. 2011 Jan;18(1):74-8. doi: 10.1107/S0909049510036824. Epub 2010 Nov 5.

Abstract

Lanthanoid ions exhibit extremely large anomalous X-ray scattering at their L(III) absorption edge. They are thus well suited for anomalous diffraction experiments. A novel class of lanthanoid complexes has been developed that combines the physical properties of lanthanoid atoms with functional chemical groups that allow non-covalent binding to proteins. Two structures of large multimeric proteins have already been determined by using such complexes. Here the use of the luminescent europium tris-dipicolinate complex Eu(DPA)(3) to solve the low-resolution structure of a 444 kDa homododecameric aminopeptidase, called PhTET1-12s from the archaea Pyrococcus horikoshii, is reported. Surprisingly, considering the low resolution of the data, the experimental electron density map is very well defined. Experimental phases obtained by using the lanthanoid complex lead to maps displaying particular structural features usually observed in higher-resolution maps. Such complexes open a new way for solving the structure of large molecular assemblies, even with low-resolution data.

摘要

镧系元素离子在其 L(III) 吸收边处表现出非常大的异常 X 射线散射。因此,它们非常适合用于异常衍射实验。已经开发出一类新型的镧系元素配合物,它将镧系原子的物理性质与允许与蛋白质非共价结合的功能化学基团结合在一起。已经使用此类配合物确定了两种大型多聚体蛋白质的结构。在这里,报道了使用发光的铕三-二吡啶甲酸配合物 Eu(DPA)(3) 来解决来自古菌 Pyrococcus horikoshii 的 444 kDa 同型十二聚体氨肽酶 PhTET1-12s 的低分辨率结构。令人惊讶的是,考虑到数据的低分辨率,实验电子密度图非常清晰。使用镧系元素配合物获得的实验相导致显示通常在更高分辨率图中观察到的特定结构特征的图。此类配合物为解决大分子量组装体的结构开辟了一条新路,即使是在低分辨率数据的情况下。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a637/3004260/c03184d651f6/s-18-00074-fig1.jpg

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