Drug Discovery Research, Astellas Pharma Inc., 21 Miyukigaoka, Tsukuba, Ibaraki 305-8585, Japan.
J Chem Inf Model. 2010 May 24;50(5):815-21. doi: 10.1021/ci100023s.
To clarify the differences between commercially available compounds, clinical candidates, and launched drugs with regard to distribution of physicochemical properties and to characterize the correlation between physicochemical properties, we conducted analyses on physicochemical descriptors of commercially available compounds, clinical candidates, and launched drugs. Initial analysis of the marginal distribution of each physicochemical property showed that the distribution of commercially available compounds obeys a more normal distribution than that of launched drugs and clinical candidates. In addition, we calculated correlation coefficient values between values of physicochemical properties and found little similarity between values of clinical candidates and those of commercially available compounds, while observing marked similarity between values of clinical candidates and those of launched drugs. We also analyzed joint distribution for two physicochemical properties, with results showing that, similar to marginal distribution, the joint distribution of commercially available compounds obeys a more normal distribution than that of launched drugs and clinical candidates. We then assessed items using the Nagahara method, originally developed by one of this study's authors. Results showed that the probability distribution of molecular weight and log P for commercially available compounds was much narrower than that of launched drugs and clinical candidates. In conclusion, clinical candidates are more similar to launched drugs than to commercially available compounds with regard to marginal distribution, joint distribution, and correlation coefficients. These findings provide deeper insight regarding the concept of "druglikeness".
为了阐明市售化合物、临床候选药物和已上市药物在理化性质分布方面的差异,并表征理化性质与之间的相关性,我们对市售化合物、临床候选药物和已上市药物的理化性质描述符进行了分析。对每种理化性质的边缘分布进行初步分析表明,市售化合物的分布遵循正态分布,而上市药物和临床候选药物的分布则更符合对数正态分布。此外,我们计算了理化性质值之间的相关系数值,发现临床候选药物与市售化合物的值之间没有相似性,而临床候选药物与已上市药物的值之间则具有明显的相似性。我们还分析了两种理化性质的联合分布,结果表明,与边缘分布相似,市售化合物的联合分布也比上市药物和临床候选药物更符合正态分布。然后,我们使用 Nagahara 法(该方法由本研究的一位作者最初提出)对各项进行了评估。结果表明,市售化合物的分子量和 log P 的概率分布比上市药物和临床候选药物窄得多。总之,临床候选药物在边缘分布、联合分布和相关系数方面与已上市药物的相似性要高于市售化合物。这些发现为“类药性”概念提供了更深入的见解。