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How the sequence of a gene can tune its translation.
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Control of ribosome traffic by position-dependent choice of synonymous codons.
Phys Biol. 2013 Oct;10(5):056011. doi: 10.1088/1478-3975/10/5/056011. Epub 2013 Oct 8.
4
Clustering of low usage codons and ribosome movement.
J Theor Biol. 1994 Oct 21;170(4):339-54. doi: 10.1006/jtbi.1994.1196.
5
A Code Within a Code: How Codons Fine-Tune Protein Folding in the Cell.
Biochemistry (Mosc). 2021 Aug;86(8):976-991. doi: 10.1134/S0006297921080083.
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Silent substitutions predictably alter translation elongation rates and protein folding efficiencies.
J Mol Biol. 2012 Sep 21;422(3):328-35. doi: 10.1016/j.jmb.2012.06.010. Epub 2012 Jun 12.
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The amino acid composition of a protein influences its expression.
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tRNA epitranscriptome determines pathogenicity of the opportunistic pathogen .
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Dicodon-based measures for modeling gene expression.
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Copy number variation in tRNA isodecoder genes impairs mammalian development and balanced translation.
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Standard Intein Gene Expression Ramps (SIGER) for Protein-Independent Expression Control.
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Global and gene-specific translational regulation in Escherichia coli across different conditions.
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Multimodal cotranslational interactions direct assembly of the human multi-tRNA synthetase complex.
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A role for codon order in translation dynamics.
Cell. 2010 Apr 16;141(2):355-67. doi: 10.1016/j.cell.2010.02.036.
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An evolutionarily conserved mechanism for controlling the efficiency of protein translation.
Cell. 2010 Apr 16;141(2):344-54. doi: 10.1016/j.cell.2010.03.031.
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Slowing bacterial translation speed enhances eukaryotic protein folding efficiency.
J Mol Biol. 2010 Mar 12;396(5):1310-8. doi: 10.1016/j.jmb.2009.12.042. Epub 2010 Jan 4.
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Functional analysis of human tRNA isodecoders.
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Maximum rrn promoter activity in Escherichia coli at saturating concentrations of free RNA polymerase.
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Genome-wide analysis of tRNA charging and activation of the eIF2 kinase Gcn2p.
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Hypusine-containing protein eIF5A promotes translation elongation.
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Coding-sequence determinants of gene expression in Escherichia coli.
Science. 2009 Apr 10;324(5924):255-8. doi: 10.1126/science.1170160.
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Dynamic Organization of Aminoacyl-tRNA Synthetase Complexes in the Cytoplasm of Human Cells.
J Biol Chem. 2009 May 15;284(20):13746-13754. doi: 10.1074/jbc.M900480200. Epub 2009 Mar 16.
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Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling.
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