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人源丝束蛋白-1 的结构、进化保守性和构象动力学,一种 F-肌动蛋白交联蛋白。

Structure, evolutionary conservation, and conformational dynamics of Homo sapiens fascin-1, an F-actin crosslinking protein.

机构信息

Department of Mechanical Engineering, MIT, 77 Massachusetts Avenue, Cambridge, MA 02139, USA.

出版信息

J Mol Biol. 2010 Jul 16;400(3):589-604. doi: 10.1016/j.jmb.2010.04.043. Epub 2010 Apr 29.

Abstract

Eukaryotes have several highly conserved actin-binding proteins that crosslink filamentous actin into compact ordered bundles present in distinct cytoskeletal processes, including microvilli, stereocilia and filopodia. Fascin is an actin-binding protein that is present predominantly in filopodia, which are believed to play a central role in normal and aberrant cell migration. An important outstanding question regards the molecular basis for the unique localization and functional properties of fascin compared with other actin crosslinking proteins. Here, we present the crystal structure of full-length Homo sapiens fascin-1, and examine its packing, conformational flexibility, and evolutionary sequence conservation. The structure reveals a novel arrangement of four tandem beta-trefoil domains that form a bi-lobed structure with approximate pseudo 2-fold symmetry. Each lobe has internal approximate pseudo 2-fold and pseudo 3-fold symmetry axes that are approximately perpendicular, with beta-hairpin triplets located symmetrically on opposite sides of each lobe that mutational data suggest are actin-binding domains. Sequence conservation analysis confirms the importance of hydrophobic core residues that stabilize the beta-trefoil fold, as well as interfacial residues that are likely to stabilize the overall fascin molecule. Sequence conservation also indicates highly conserved surface patches near the putative actin-binding domains of fascin, which conformational dynamics analysis suggests to be coupled via an allosteric mechanism that might have important functional implications for F-actin crosslinking by fascin.

摘要

真核生物有几种高度保守的肌动蛋白结合蛋白,它们将丝状肌动蛋白交联成紧密有序的束,存在于不同的细胞骨架过程中,包括微绒毛、静纤毛和丝状伪足。Fascin 是一种肌动蛋白结合蛋白,主要存在于丝状伪足中,人们认为丝状伪足在正常和异常细胞迁移中发挥着核心作用。一个重要的悬而未决的问题是 fascin 与其他肌动蛋白交联蛋白相比,其独特的定位和功能特性的分子基础。在这里,我们展示了全长人 fascin-1 的晶体结构,并研究了其包装、构象灵活性和进化序列保守性。该结构揭示了四个串联的 β-三叶折叠结构域的新颖排列方式,形成了具有近似假 2 倍对称性的双叶结构。每个叶具有内部近似假 2 倍和假 3 倍对称轴,大致垂直,β-发夹三聚体位于每个叶的相对侧,突变数据表明它们是肌动蛋白结合域。序列保守性分析证实了稳定 β-三叶折叠的疏水性核心残基的重要性,以及可能稳定 fascin 分子整体的界面残基。序列保守性还表明 fascin 中假定的肌动蛋白结合域附近存在高度保守的表面斑块,构象动力学分析表明,这些斑块通过别构机制耦合,这可能对 fascin 交联 F-肌动蛋白具有重要的功能意义。

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