Department of Biology, University of Copenhagen, Ole Maaloes vej. 5, 2200, Copenhagen, Denmark.
Department of Systems Biology, Technical University of Denmark, Kemitorvet 208, 2800 Lyngby, Denmark.
Plant J. 2010 Jul;63(2):212-228. doi: 10.1111/j.1365-313X.2010.04243.x. Epub 2010 Apr 29.
Studies of the resurrection plant Craterostigma plantagineum have revealed some of the mechanisms which these desiccation-tolerant plants use to survive environments with extreme dehydration and restricted seasonal water. Most resurrection plants are polyploid with large genomes, which has hindered efforts to obtain whole genome sequences and perform mutational analysis. However, the application of deep sequencing technologies to transcriptomics now permits large-scale analyses of gene expression patterns despite the lack of a reference genome. Here we use pyro-sequencing to characterize the transcriptomes of C. plantagineum leaves at four stages of dehydration and rehydration. This reveals that genes involved in several pathways, such as those required for vitamin K and thiamin biosynthesis, are tightly regulated at the level of gene expression. Our analysis also provides a comprehensive picture of the array of cellular responses controlled by gene expression that allow resurrection plants to survive desiccation.
对复活植物 Craterostigma plantagineum 的研究揭示了这些耐旱植物在极端脱水和季节性限水的环境中生存所使用的一些机制。大多数复活植物是多倍体,基因组庞大,这阻碍了获得全基因组序列和进行突变分析的努力。然而,转录组学的深度测序技术的应用,即使缺乏参考基因组,也允许大规模分析基因表达模式。在这里,我们使用焦磷酸测序来描述 C. plantagineum 叶片在脱水和再水合的四个阶段的转录组。这表明,参与几种途径的基因,如维生素 K 和硫胺素生物合成所需的基因,在基因表达水平受到严格调控。我们的分析还提供了一幅全面的图景,展示了由基因表达控制的细胞反应的排列,使复活植物能够在干旱中生存。