• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

探索胸腺嘧啶与电子结构的倾斜到峰值 S2/S1 接缝的交界面:通过直接量子动力学计算。

Exploring the sloped-to-peaked S2/S1 seam of intersection of thymine with electronic structure and direct quantum dynamics calculations.

机构信息

Institut de Química Computacional, Departament de Química, Universitat de Girona, Campus Montilivi, 17071 Girona, Spain.

出版信息

Phys Chem Chem Phys. 2010 May 21;12(19):4949-58. doi: 10.1039/c001556c. Epub 2010 Mar 29.

DOI:10.1039/c001556c
PMID:20445901
Abstract

The role of the seam of intersection between the lowest (pi,pi*) and (n,pi*) excited states in the decay of electronically excited singlet thymine has been investigated with ab initio complete active space self-consistent field (CASSCF) calculations and direct dynamics variational multiconfiguration Gaussian (DD-vMCG) quantum dynamics on the full-dimensional CASSCF surface, with 39 degrees of freedom. The seam has a sloped-to-peaked topography, and the dynamics at the different segments of the seam have been studied by varying the initial conditions of the propagation. When the wave packet is directed to the peaked segments, part of it traverses the seam, stays on the (pi,pi*) state and heads towards decay to the ground state. In contrast to this, when the wave packet is driven to sloped seam segments it bounces back to the minimum of the (pi,pi*) state. Significant population transfer to the (n,pi*) state is observed in both cases. The results suggest that a sloped-to-peaked topography can be used to control photochemical reactivity, by driving the wave packet to different regions of the seam where a different outcome of the propagation can be expected.

摘要

用从头计算完全活性空间自洽场 (CASSCF) 计算和全维 CASSCF 表面上的直接动力学变分多组态高斯 (DD-vMCG) 量子动力学,研究了最低(π,π*)和(n,π*)激发态的交界缝在电子激发态胸腺嘧啶衰变中的作用,自由度为 39。交界缝具有倾斜到峰值的地形,通过改变传播的初始条件研究了交界缝不同部分的动力学。当波包指向峰值部分时,其中一部分穿过交界缝,停留在(π,π*)态上,并朝向基态衰变。与此相反,当波包被驱动到倾斜的交界缝部分时,它会反弹回(π,π*)态的最低点。在这两种情况下都观察到向(n,π*)态的显著转移。结果表明,通过将波包驱动到交界缝的不同区域,可以使用倾斜到峰值的地形来控制光化学反应性,在不同区域的传播可以预期不同的结果。

相似文献

1
Exploring the sloped-to-peaked S2/S1 seam of intersection of thymine with electronic structure and direct quantum dynamics calculations.探索胸腺嘧啶与电子结构的倾斜到峰值 S2/S1 接缝的交界面:通过直接量子动力学计算。
Phys Chem Chem Phys. 2010 May 21;12(19):4949-58. doi: 10.1039/c001556c. Epub 2010 Mar 29.
2
Photophysics of the pi,pi* and n,pi* states of thymine: MS-CASPT2 minimum-energy paths and CASSCF on-the-fly dynamics.胸腺嘧啶π,π* 和n,π* 态的光物理:MS-CASPT2 最低能量路径及CASSCF 实时动力学
J Phys Chem A. 2009 Sep 24;113(38):10211-8. doi: 10.1021/jp905303g.
3
Photodynamics simulations of thymine: relaxation into the first excited singlet state.嘧啶的光动力学模拟:弛豫到第一激发单线态。
J Phys Chem A. 2009 Nov 12;113(45):12686-93. doi: 10.1021/jp905085x.
4
Ab initio molecular dynamics and time-resolved photoelectron spectroscopy of electronically excited uracil and thymine.电子激发态尿嘧啶和胸腺嘧啶的从头算分子动力学及时间分辨光电子能谱
J Phys Chem A. 2007 Aug 30;111(34):8500-8. doi: 10.1021/jp0723665. Epub 2007 Aug 9.
5
Photochemistry of the water dimer: time-dependent quantum wave-packet description of the dynamics at the S1-S0 conical intersection.水二聚体的光化学:S1-S0锥形交叉点动力学的含时量子波包描述
J Chem Phys. 2009 Oct 7;131(13):134307. doi: 10.1063/1.3226568.
6
Efficient photochemical merocyanine-to-spiropyran ring closure mechanism through an extended conical intersection seam. A model CASSCF/CASPT2 study.通过扩展的锥形交叉缝实现高效的光化学部花青-螺吡喃闭环机制。一项模型CASSCF/CASPT2研究。
J Phys Chem A. 2006 Mar 23;110(11):3986-91. doi: 10.1021/jp056208u.
7
Controlling S1/S0 decay and the balance between photochemistry and photostability in benzene: a direct quantum dynamics study.控制苯中S1/S0衰变以及光化学与光稳定性之间的平衡:一项直接量子动力学研究。
J Phys Chem A. 2008 Dec 18;112(50):13017-27. doi: 10.1021/jp803740a.
8
Conical intersections in thymine.胸腺嘧啶中的锥形交叉点。
J Phys Chem A. 2006 Dec 14;110(49):13238-44. doi: 10.1021/jp0633897.
9
Benign decay vs. photolysis in the photophysics and photochemistry of 5-bromouracil. A computational study.5-溴尿嘧啶光物理和光化学中的良性衰变与光解:一项计算研究
J Phys Chem A. 2009 May 14;113(19):5489-95. doi: 10.1021/jp811330v.
10
Photophysics and deactivation pathways of thymine.胸腺嘧啶的光物理性质及失活途径
J Phys Chem A. 2008 Sep 11;112(36):8273-9. doi: 10.1021/jp804309x. Epub 2008 Aug 15.

引用本文的文献

1
Photoinduced hydrogen dissociation in thymine predicted by coupled cluster theory.耦合簇理论预测胸腺嘧啶中的光致氢解离
Nat Commun. 2024 Nov 22;15(1):10128. doi: 10.1038/s41467-024-54436-2.
2
Characterizing Conical Intersections in DNA/RNA Nucleobases with Multiconfigurational Wave Functions of Varying Active Space Size.用变大小的活性空间多组态波函数刻画 DNA/RNA 核碱基中的锥形交叉。
J Chem Theory Comput. 2023 Nov 28;19(22):8258-8272. doi: 10.1021/acs.jctc.3c00577. Epub 2023 Oct 26.
3
The Ultrafast Quantum Dynamics of Photoexcited Adenine-Thymine Basepair Investigated with a Fragment-based Diabatization and a Linear Vibronic Coupling Model.
基于片段化双原子轨道和线性振子耦合模型研究腺嘌呤-胸腺嘧啶碱基对光激发超快量子动力学。
J Phys Chem A. 2021 Oct 14;125(40):8912-8924. doi: 10.1021/acs.jpca.1c08132. Epub 2021 Oct 5.
4
Nonadiabatic Absorption Spectra and Ultrafast Dynamics of DNA and RNA Photoexcited Nucleobases.DNA和RNA光激发核碱基的非绝热吸收光谱与超快动力学
Molecules. 2021 Mar 20;26(6):1743. doi: 10.3390/molecules26061743.
5
TURBOMOLE: Modular program suite for ab initio quantum-chemical and condensed-matter simulations.TURBOMOLE:用于从头算量子化学和凝聚态物质模拟的模块化程序套件。
J Chem Phys. 2020 May 14;152(18):184107. doi: 10.1063/5.0004635.
6
Molecular Photochemistry: Recent Developments in Theory.分子光化学:理论的最新进展。
Angew Chem Int Ed Engl. 2020 Sep 21;59(39):16832-16846. doi: 10.1002/anie.201916381. Epub 2020 Jun 17.
7
Photochemical pathways in nucleobases measured with an X-ray FEL.用 X 射线自由电子激光测量碱基的光化学生成途径。
Philos Trans A Math Phys Eng Sci. 2019 May 20;377(2145):20170473. doi: 10.1098/rsta.2017.0473.
8
Insights into the deactivation of 5-bromouracil after ultraviolet excitation.紫外线激发后5-溴尿嘧啶失活的研究洞察
Philos Trans A Math Phys Eng Sci. 2017 Apr 28;375(2092). doi: 10.1098/rsta.2016.0202.
9
Assessment of the Potential Energy Hypersurfaces in Thymine within Multiconfigurational Theory: CASSCF vs. CASPT2.多组态理论下胸腺嘧啶势能超曲面的评估:完全活性空间自洽场方法与完全活性空间二阶微扰理论方法的比较
Molecules. 2016 Dec 3;21(12):1666. doi: 10.3390/molecules21121666.