Suppr超能文献

耦合簇理论预测胸腺嘧啶中的光致氢解离

Photoinduced hydrogen dissociation in thymine predicted by coupled cluster theory.

作者信息

Kjønstad Eirik F, Fajen O Jonathan, Paul Alexander C, Angelico Sara, Mayer Dennis, Gühr Markus, Wolf Thomas J A, Martínez Todd J, Koch Henrik

机构信息

Department of Chemistry, Stanford University, Stanford, CA, USA.

Stanford PULSE Institute, SLAC National Accelerator Laboratory, Menlo Park, CA, USA.

出版信息

Nat Commun. 2024 Nov 22;15(1):10128. doi: 10.1038/s41467-024-54436-2.

Abstract

The fate of thymine upon excitation by ultraviolet radiation has been the subject of intense debate. Today, it is widely believed that its ultrafast excited state gas phase decay stems from a radiationless transition from the bright ππ* state to a dark nπ* state. However, conflicting theoretical predictions have made the experimental data difficult to interpret. Here we simulate the early gas phase ultrafast dynamics in thymine at the highest level of theory to date. This is made possible by performing wavepacket dynamics with a recently developed coupled cluster method. Our simulation confirms an ultrafast ππ* to nπ* transition (τ = 41 ± 14 fs). Furthermore, the predicted oxygen-edge X-ray absorption spectra agree quantitatively with experiment. We also predict an as-yet uncharacterized πσ* channel that leads to hydrogen dissociation at one of the two N-H bonds. Similar behavior has been identified in other heteroaromatic compounds, including adenine, and several authors have speculated that a similar pathway may exist in thymine. However, this was never confirmed theoretically or experimentally. This prediction calls for renewed efforts to experimentally identify or exclude the presence of this channel.

摘要

胸腺嘧啶在紫外线激发下的命运一直是激烈争论的主题。如今,人们普遍认为其超快激发态气相衰变源于从明亮的ππ态到暗的nπ态的无辐射跃迁。然而,相互矛盾的理论预测使得实验数据难以解释。在此,我们在迄今为止最高的理论水平上模拟胸腺嘧啶早期气相超快动力学。这通过使用最近开发的耦合簇方法进行波包动力学得以实现。我们的模拟证实了从ππ到nπ的超快跃迁(τ = 41 ± 14飞秒)。此外,预测的氧边X射线吸收光谱与实验定量相符。我们还预测了一个尚未表征的πσ*通道,该通道导致两个N - H键之一处的氢解离。在包括腺嘌呤在内的其他杂环芳烃化合物中也发现了类似行为,几位作者推测胸腺嘧啶中可能存在类似途径。然而,这从未在理论上或实验上得到证实。这一预测呼吁重新努力通过实验来识别或排除该通道的存在。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/77fc/11584849/15e069b7e13e/41467_2024_54436_Fig1_HTML.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验