School of Chemistry and Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
Bioinformatics. 2010 Jun 1;26(11):1470-1. doi: 10.1093/bioinformatics/btq154. Epub 2010 May 7.
Arcadia translates text-based descriptions of biological networks (SBML files) into standardized diagrams (SBGN PD maps). Users can view the same model from different perspectives and easily alter the layout to emulate traditional textbook representations.
Arcadia is written in C++. The source code is available (along with Mac OS and Windows binaries) under the GPL from http://arcadiapathways.sourceforge.net/.
Arcadia 将基于文本的生物网络描述(SBML 文件)转换为标准化的图表(SBGN PD 地图)。用户可以从不同的角度查看同一个模型,并轻松地更改布局以模拟传统的教科书表示形式。
Arcadia 是用 C++编写的。源代码可在 GPL 下从 http://arcadiapathways.sourceforge.net/ 获得(同时提供 Mac OS 和 Windows 二进制文件)。