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Statistical mechanics and hydrodynamics of bacterial suspensions.细菌悬浮液的统计力学与流体动力学
Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15567-72. doi: 10.1073/pnas.0906586106. Epub 2009 Aug 28.
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Shearing active gels close to the isotropic-nematic transition.在各向同性-向列相转变附近剪切活性凝胶。
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Steady-state chemotaxis in Escherichia coli.大肠杆菌中的稳态趋化作用。
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Statistical mechanics of interacting run-and-tumble bacteria.相互作用的随机游动与翻滚细菌的统计力学
Phys Rev Lett. 2008 May 30;100(21):218103. doi: 10.1103/PhysRevLett.100.218103. Epub 2008 May 29.
6
Differential dynamic microscopy: probing wave vector dependent dynamics with a microscope.差分动态显微镜:用显微镜探测波矢相关动力学
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A wall of funnels concentrates swimming bacteria.一排漏斗将游动的细菌聚集起来。
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Long-lived giant number fluctuations in a swarming granular nematic.成群颗粒向列相中的长寿命巨数涨落
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9
Integration of Langevin equations with multiplicative noise and the viability of field theories for absorbing phase transitions.含乘性噪声的朗之万方程的积分与用于吸收相变的场论的可行性
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10
Motility of Escherichia coli cells in clusters formed by chemotactic aggregation.趋化聚集形成的大肠杆菌细胞簇的运动性。
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复制细菌中的相分离被捕获,这为形成图案提供了一种通用途径。

Arrested phase separation in reproducing bacteria creates a generic route to pattern formation.

机构信息

School of Physics and Astronomy, University of Edinburgh, Mayfield Road, Edinburgh EH9 3JZ, United Kingdom.

出版信息

Proc Natl Acad Sci U S A. 2010 Jun 29;107(26):11715-20. doi: 10.1073/pnas.1001994107. Epub 2010 May 24.

DOI:10.1073/pnas.1001994107
PMID:20498087
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2900711/
Abstract

We present a generic mechanism by which reproducing microorganisms, with a diffusivity that depends on the local population density, can form stable patterns. For instance, it is known that a decrease of bacterial motility with density can promote separation into bulk phases of two coexisting densities; this is opposed by the logistic law for birth and death that allows only a single uniform density to be stable. The result of this contest is an arrested nonequilibrium phase separation in which dense droplets or rings become separated by less dense regions, with a characteristic steady-state length scale. Cell division predominates in the dilute regions and cell death in the dense ones, with a continuous flux between these sustained by the diffusivity gradient. We formulate a mathematical model of this in a case involving run-and-tumble bacteria and make connections with a wider class of mechanisms for density-dependent motility. No chemotaxis is assumed in the model, yet it predicts the formation of patterns strikingly similar to some of those believed to result from chemotactic behavior.

摘要

我们提出了一种通用机制,通过这种机制,具有扩散率且扩散率取决于局部种群密度的再生微生物可以形成稳定的模式。例如,众所周知,随着密度的增加细菌运动能力的降低可以促进两种共存密度的大块相分离;这与允许只有单一均匀密度稳定的逻辑定律相矛盾。这场竞争的结果是一种被阻止的非平衡相分离,其中密集的液滴或环被密度较低的区域隔开,具有特征性的稳态长度尺度。细胞分裂在稀溶液区域占主导地位,细胞死亡在密溶液区域占主导地位,扩散梯度维持着两者之间的连续通量。我们在涉及跑-停细菌的情况下对这种情况进行了数学建模,并与更广泛的密度依赖性运动机制建立了联系。该模型中不假设趋化性,但它预测了形成的模式与一些被认为是由趋化行为引起的模式非常相似。