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盘基网柄菌基因家族包含一个长的内部氨基酸重复序列。

Dictyostelium discoideum gene family contains a long internal amino acid repeat.

作者信息

Ennis H L, Giorda R, Ohmachi T, Shaw D R, Blume J E

机构信息

Roche Institute of Molecular Biology, Roche Research Center, Nutley, NJ 07110.

出版信息

Dev Genet. 1991;12(1-2):133-8. doi: 10.1002/dvg.1020120121.

DOI:10.1002/dvg.1020120121
PMID:2049872
Abstract

Two different cDNA clones denoted pTO270-6 and pTO270-11 represent two mRNAs that are developmentally regulated during spore germination in Dictyostelium discoideum. The respective mRNAs are found only during early germination and are not present in other stages of growth or multicellular development. Four different genomic clones that hybridize to sequences that are common to both of the 270 cDNA clones were isolated from Dictyostelium libraries and sequenced. Two are the genes for the two cDNAs, and the other two represent genes that do not seem to be transcribed. All four genomic sequences possess a very unusual internal feature in the deduced protein sequences composed of a monotonous repeat of the tetrapeptide threonine-glutamic acid-threonine-proline. The other portions of the proteins have no homology among themselves. The deduced protein corresponding to the 270-6 gene is very similar to avocado (Persea americana) cellulase. Since cellulose in the spore wall has to be digested during spore germination this suggests that this protein may function as an endo-(1,4)-beta-D-glucanase during germination.

摘要

两个不同的cDNA克隆,分别命名为pTO270 - 6和pTO270 - 11,代表了两种在盘基网柄菌孢子萌发过程中受到发育调控的mRNA。相应的mRNA仅在萌发早期出现,在生长或多细胞发育的其他阶段不存在。从盘基网柄菌文库中分离出四个与270 cDNA克隆共有的序列杂交的不同基因组克隆并进行测序。其中两个是两个cDNA的基因,另外两个代表似乎不被转录的基因。所有四个基因组序列在推导的蛋白质序列中都具有一个非常不寻常的内部特征,由苏氨酸 - 谷氨酸 - 苏氨酸 - 脯氨酸四肽的单调重复组成。蛋白质的其他部分彼此之间没有同源性。与270 - 6基因对应的推导蛋白质与鳄梨(Persea americana)纤维素酶非常相似。由于孢子壁中的纤维素在孢子萌发过程中必须被消化,这表明该蛋白质在萌发过程中可能作为一种内切 -(1,4)-β - D - 葡聚糖酶发挥作用。

相似文献

1
Dictyostelium discoideum gene family contains a long internal amino acid repeat.盘基网柄菌基因家族包含一个长的内部氨基酸重复序列。
Dev Genet. 1991;12(1-2):133-8. doi: 10.1002/dvg.1020120121.
2
A shared internal threonine-glutamic acid-threonine-proline repeat defines a family of Dictyostelium discoideum spore germination specific proteins.一个共享的内部苏氨酸-谷氨酸-苏氨酸-脯氨酸重复序列定义了一类盘基网柄菌孢子萌发特异性蛋白。
Biochemistry. 1990 Aug 7;29(31):7264-9. doi: 10.1021/bi00483a015.
3
Characterization of genes that are developmentally regulated during Dictyostelium discoideum spore germination.盘基网柄菌孢子萌发过程中发育调控基因的特征分析。
Dev Genet. 1988;9(4-5):303-13. doi: 10.1002/dvg.1020090412.
4
Structure, expression, and inactivation by gene disruption of the Dictyostelium discoideum prespore gene EB4.盘基网柄菌前孢子基因EB4的结构、表达及基因敲除失活
Dev Genet. 1991;12(1-2):163-9. doi: 10.1002/dvg.1020120125.
5
A Dictyostelium discoideum cellulase is a member of a spore germination-specific gene family.
J Biol Chem. 1991 Aug 15;266(23):15432-7.
6
Coordinate regulation of the spore coat genes in Dictyostelium discoideum.盘基网柄菌中孢子壁基因的协同调控
Dev Genet. 1991;12(1-2):123-32. doi: 10.1002/dvg.1020120120.
7
Ras-related genes in Dictyostelium discoideum.盘基网柄菌中的Ras相关基因。
Dev Genet. 1991;12(1-2):147-53. doi: 10.1002/dvg.1020120123.
8
Developmental protein synthesis is required for the transcription of Dictyostelium prespore genes.盘基网柄菌前孢子基因的转录需要发育性蛋白质合成。
Dev Genet. 1991;12(1-2):113-22. doi: 10.1002/dvg.1020120119.
9
Structure, expression, and regulation of members of the developmentally controlled V and H gene classes from Dictyostelium.盘基网柄菌发育调控的V基因类和H基因类成员的结构、表达及调控
Dev Genet. 1991;12(1-2):88-97. doi: 10.1002/dvg.1020120116.
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Cyclic nucleotide phosphodiesterase of Dictyostelium discoideum and its glycoprotein inhibitor: structure and expression of their genes.盘基网柄菌的环核苷酸磷酸二酯酶及其糖蛋白抑制剂:它们基因的结构与表达
Dev Genet. 1991;12(1-2):104-12. doi: 10.1002/dvg.1020120118.

引用本文的文献

1
AT-rich upstream sequence elements regulate spore germination-specific expression of the Dictyostelium discoideum celA gene.富含AT的上游序列元件调控盘基网柄菌celA基因的孢子萌发特异性表达。
Nucleic Acids Res. 1995 Aug 11;23(15):3018-25. doi: 10.1093/nar/23.15.3018.
2
The Dictyostelium discoideum spore germination-specific cellulase is organized into functional domains.盘基网柄菌孢子萌发特异性纤维素酶被组织成功能结构域。
J Bacteriol. 1992 Dec;174(23):7834-7. doi: 10.1128/jb.174.23.7834-7837.1992.