Division for Simulation of Biological Systems, Universität Tübingen, Tübingen, Germany.
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W497-502. doi: 10.1093/nar/gkq477. Epub 2010 May 27.
Predicting subcellular localization has become a valuable alternative to time-consuming experimental methods. Major drawbacks of many of these predictors is their lack of interpretability and the fact that they do not provide an estimate of the confidence of an individual prediction. We present YLoc, an interpretable web server for predicting subcellular localization. YLoc uses natural language to explain why a prediction was made and which biological property of the protein was mainly responsible for it. In addition, YLoc estimates the reliability of its own predictions. YLoc can, thus, assist in understanding protein localization and in location engineering of proteins. The YLoc web server is available online at www.multiloc.org/YLoc.
预测亚细胞定位已经成为一种替代耗时的实验方法的有价值的手段。这些预测器的主要缺点是它们缺乏可解释性,并且它们不能提供对单个预测的置信度的估计。我们提出了 YLoc,这是一个用于预测亚细胞定位的可解释的网络服务器。YLoc 使用自然语言来解释为什么做出了预测,以及蛋白质的哪个生物学特性主要对此负责。此外,YLoc 还估计了其自身预测的可靠性。因此,YLoc 可以帮助理解蛋白质的定位和蛋白质的定位工程。YLoc 网络服务器可在线访问,网址为 www.multiloc.org/YLoc。