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本文引用的文献

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On the Origin of Species by Means of Natural Selection, or the Preservation of Favoured Races in the Struggle for Life.《物种起源》:通过自然选择,即生存斗争中有利种族的保存
Br Foreign Med Chir Rev. 1860 Apr;25(50):367-404.
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Divergence in an obligate mutualism is not explained by divergent climatic factors.专性互利共生中的趋异现象不能用不同的气候因素来解释。
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Species relative abundance and direction of introgression in oaks.橡树的物种相对丰度和基因渗入方向。
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Climate, niche evolution, and diversification of the "bird-cage" evening primroses (Oenothera, sections Anogra and Kleinia).气候、生态位进化与“鸟笼”月见草(Oenothera,Anogra 和 Kleinia 两个组)的多样化。
Am Nat. 2009 Feb;173(2):225-40. doi: 10.1086/595757.
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An integrative method for delimiting cohesion species: finding the population-species interface in a group of Californian trapdoor spiders with extreme genetic divergence and geographic structuring.一种综合的凝聚种界定方法:在一群具有极端遗传分化和地理结构的加利福尼亚漏斗网蜘蛛中寻找种群-物种界面。
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Phylogenetic niche conservatism, phylogenetic signal and the relationship between phylogenetic relatedness and ecological similarity among species.系统发育生态位保守性、系统发育信号以及物种间系统发育相关性与生态相似性之间的关系。
Ecol Lett. 2008 Oct;11(10):995-1003. doi: 10.1111/j.1461-0248.2008.01229.x. Epub 2008 Jul 30.
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A working guide to boosted regression trees.提升回归树实用指南。
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Integrating GIS-based environmental data into evolutionary biology.将基于地理信息系统的环境数据整合到进化生物学中。
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10
Adding more ecology into species delimitation: ecological niche models and phylogeography help define cryptic species in the black salamander (Aneides flavipunctatus).在物种界定中融入更多生态学要素:生态位模型和系统发育地理学有助于界定黑斑蝾螈(Aneides flavipunctatus)中的隐存物种。
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区域差异夸大了生态位模型中的生态分歧。

Regional variation exaggerates ecological divergence in niche models.

机构信息

National Institute for Mathematical and Biological Synthesis, University of Tennessee, Knoxville, TN 37996-1527, USA.

出版信息

Syst Biol. 2010 May;59(3):298-306. doi: 10.1093/sysbio/syq005. Epub 2010 Feb 26.

DOI:10.1093/sysbio/syq005
PMID:20525637
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2910897/
Abstract

Traditionally, the goal of systematics has been to produce classifications that are both strongly supported and biologically meaningful. In recent years several authors have advocated complementing phylogenetic analyses with measures of another form of evolutionary change, ecological divergence. These analyses frequently rely on ecological niche models to determine if species have comparable environmental requirements, but it has heretofore been difficult to test the accuracy of these inferences. To address this problem, I simulate the geographic distributions of allopatric species with identical environmental requirements. I then test whether existing analyses based on geographic distributions will correctly infer that the 2 species' requirements are identical. This work demonstrates that when taxa disperse to different environments, many analyses can erroneously infer changes in environmental requirements, but the severity of the problem depends on the method used. As this could exaggerate the number of ecologically distinct taxa in a clade, I suggest diagnostics to mitigate this problem.

摘要

传统上,系统学的目标是生成既具有强支持度又具有生物学意义的分类。近年来,有几位作者提倡在系统发育分析的基础上补充另一种形式的进化变化的度量,即生态分歧。这些分析通常依赖于生态位模型来确定物种是否具有相似的环境需求,但迄今为止,很难测试这些推断的准确性。为了解决这个问题,我模拟了具有相同环境需求的异域物种的地理分布。然后,我测试现有的基于地理分布的分析是否能正确推断出这两个物种的需求是相同的。这项工作表明,当分类单元分散到不同的环境中时,许多分析可能会错误地推断出环境需求的变化,但问题的严重程度取决于所使用的方法。由于这可能会夸大一个类群中具有明显生态差异的分类单元的数量,因此我建议使用诊断方法来减轻这个问题。